Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., Sensory box histidine kinase FleS from Pseudomonas putida KT2440

 Score =  255 bits (652), Expect = 1e-72
 Identities = 153/334 (45%), Positives = 208/334 (62%), Gaps = 15/334 (4%)

Query: 13  LDSLEDQVERYKQVLDVMPAGVILLDTQGIVREANPEAQRLLDVPLVGEKWYSVIQIAFA 72
           L   E    R + +LD++P GVI++D QG+VREANP A  LL  PL+G+ W  VI  +FA
Sbjct: 70  LSEKERLANRLQNLLDLLPGGVIVIDGQGLVREANPAACELLGEPLIGQLWRQVIARSFA 129

Query: 73  PRDDDGHEISLRNGRKVRLAISA--STTGQLILITDLTETRLLQSRISDLQRLSSLGRMV 130
           PR DDGHE+SLR+GR++ +A  +  +  GQL+L+ DLTETR LQ +++  +RLSSLGRMV
Sbjct: 130 PRKDDGHEVSLRDGRRLSIATRSLDAEPGQLVLLNDLTETRRLQDQLARHERLSSLGRMV 189

Query: 131 ASLAHQVRTPLSSAMLYAANLA--APNLPPATRERFQSKLVDRLHDLEKQVNDMLLFAKG 188
           ASLAHQ+RTPLS+AMLYA +LA     L   TR+RF + L +RLH+LE QV DML+FA+G
Sbjct: 190 ASLAHQIRTPLSAAMLYAGHLADNEQALSAQTRQRFAATLKERLHELEHQVRDMLVFARG 249

Query: 189 GDNKVVMPFSIGDLA---AEFMPMVETALKNNQIDYGQ-EVESEETMLLGNANALASALS 244
                     +GD     A F  + + A  + Q    + + +S    LL N + L  AL 
Sbjct: 250 -------ELPLGDRVTPKALFQALQQAAQAHVQGHAVRWQCDSHLGELLCNRDTLVGALL 302

Query: 245 NLVMNALQIAGKGSQIDVFFRPVNGELKISVQDNGPGVPESLQHKIMEPFFTTRSQGTGL 304
           NL+ NALQ +   +++ V        L + V D G G+   L  ++ EPF TT++ GTGL
Sbjct: 303 NLIENALQASDGPARLKVHLYRRERSLHLCVSDAGSGIDAGLLGRLGEPFLTTKATGTGL 362

Query: 305 GLAVVQMVCRAHGGRLELISKEGEGACFTMCIPL 338
           GLAVV+ V RAH G + L SK G G C  + +PL
Sbjct: 363 GLAVVKAVVRAHQGTINLRSKVGRGTCVRVELPL 396