Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 744 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score = 99.0 bits (245), Expect = 4e-25
 Identities = 93/367 (25%), Positives = 164/367 (44%), Gaps = 45/367 (12%)

Query: 18  DQVERYKQ-VLDVMPAGVILLDTQGIVREANPEAQRLLDVPL---VGEKWYSVIQIAFAP 73
           D+  R+ + VL  + +GVI LD  G +   N  A  L+ + L   VG+    VI      
Sbjct: 383 DERRRFTETVLAGVSSGVIGLDAAGRIHLPNRSAGELIGINLDDNVGQDIRDVIPELSES 442

Query: 74  RDDDGHEISLRNGRKVRLA-----------------ISASTTGQLILITDLTETRLLQSR 116
            D+          R+VRL+                 + +   G ++   D+TE       
Sbjct: 443 LDEAIRRPEKLVQREVRLSTAGGRSRILLVRVAAERLESEIIGYVVTFDDITE------- 495

Query: 117 ISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAPNLP-----PATRERFQSKLVDR 171
           +   QR ++   +   +AH+++ PL+   L A  L    L      P T       +V +
Sbjct: 496 LVSAQRTAAWADVARRIAHEIKNPLTPIQLSAERLKRKYLKEIQSDPETYVNLVETIVRQ 555

Query: 172 LHDLEKQVNDMLLFAKGGDNKVVMPFSIGDLAAEFMPMVETALKNNQIDYGQEVESEETM 231
           + D+ + V++   FA+    ++  P  + D+  + M +  T   N  +++   +   +  
Sbjct: 556 VGDIGRMVDEFSSFARMPAPQI-KPDDLNDICRQAMFLQRTG--NPGVEFVHHLPDGKVP 612

Query: 232 LLGNANALASALSNLVMNALQ-IAGKGS------QIDVFFRPVNGELKISVQDNGPGVPE 284
           +L ++  +  AL+NL+ NA++ I G+        +I +     +  L ++V+DNG G+P 
Sbjct: 613 VLCDSRLIGQALTNLLKNAVEAIQGRDDPEAPRGRIALSLVSHSDRLVVTVEDNGKGLPT 672

Query: 285 SLQHKIMEPFFTTRSQGTGLGLAVVQMVCRAHGGRLELISKEGEGACFTMCIPLERQADS 344
             + ++ EP+ TTR++GTGLGLA+V+ +   HGG L L    G GA   +  P   Q  S
Sbjct: 673 ENRERLTEPYVTTRTKGTGLGLAIVKKIMEDHGGDLYLEDAPGGGARIGLVFPSSEQQQS 732

Query: 345 SNSETGE 351
               TGE
Sbjct: 733 --QATGE 737