Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., Sensor protein of zinc sigma-54-dependent two-component system from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 62/225 (27%), Positives = 108/225 (48%), Gaps = 3/225 (1%)

Query: 121 QRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAPNLPPATRERFQSKLVDRLHDLEKQVN 180
           ++L ++G + A +AH++R PLSS    A   A               +      L + V+
Sbjct: 242 EKLVAMGHLAAGVAHEIRNPLSSIKGLAKYFAERTPAGGESHELAQVMAKEADRLNRVVS 301

Query: 181 DMLLFAKGGDNKVVMPFSIGDLAAEFMPMVETALKNNQIDYGQEVESEETMLLGNANALA 240
           ++L   K   +  +   ++ D+    + +V    ++ +I            +  + + L 
Sbjct: 302 ELLELVKPA-HLTLQTVNLNDIITHSLNLVSQDAQSREIQLRFTANETLKRIQADPDRLT 360

Query: 241 SALSNLVMNALQIAGKGSQIDVFFRPVNGE-LKISVQDNGPGVPESLQHKIMEPFFTTRS 299
             L NL +NA+   G+   I V  +    + + I+V D+G G+       I  P+FTT++
Sbjct: 361 QVLLNLYLNAIHAIGRQGTISVEAKESGTDRVIITVTDSGKGIAPDQLEAIFTPYFTTKA 420

Query: 300 QGTGLGLAVVQMVCRAHGGRLELISKEGEGACFTMCIP-LERQAD 343
            GTGLGLAVVQ +   HGG +++ S EG+GA FT+ +P + RQ D
Sbjct: 421 DGTGLGLAVVQNIIEQHGGAIKVKSIEGKGAVFTIWLPVIARQQD 465