Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., sensory histidine kinase in two-component regulatory system with PhoB (NCBI) from Escherichia coli BW25113

 Score = 92.0 bits (227), Expect = 3e-23
 Identities = 87/355 (24%), Positives = 162/355 (45%), Gaps = 40/355 (11%)

Query: 16  LEDQVERYKQVLDVMPAGVILLDTQGIVREANPEAQRLLDVPLVGEKWYSVIQIAFAP-- 73
           L + ++R++   + +P  V+L   +G +   N  AQ++L +    +   +++ +   P  
Sbjct: 93  LGNLIKRFRSGAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEF 152

Query: 74  ------RDDDGH-EISLRNGRKVRLAISASTTGQLILIT-DLTETRLLQSRISDLQRLSS 125
                 RD      + L  GR + + +   T  QL+++  D+T+   L+          +
Sbjct: 153 TQYLKTRDFSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEG---------A 203

Query: 126 LGRMVASLAHQVRTPLSSAMLYAANLAAPNLPPATRERFQSKLVDRLHDLEKQVNDMLLF 185
                A+++H++RTPL+    Y   +    L  A RE+    + ++   +E  V  +L  
Sbjct: 204 RRNFFANVSHELRTPLTVLQGYLEMMNEQPLEGAVREKALHTMREQTQRMEGLVKQLLTL 263

Query: 186 AKGG-------DNKVVMPFSIGDLAAEFMPMVETALKNN-QIDYGQEVESEETMLLGNAN 237
           +K         + KV +P  +  +  E   + +       +ID G +V        GN +
Sbjct: 264 SKIEAAPTHLLNEKVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVS-------GNED 316

Query: 238 ALASALSNLVMNALQIAGKGSQIDVFFRPVNGELKISVQDNGPGVPESLQHKIMEPFF-- 295
            L SA+SNLV NA+    +G+ I V ++ V    + SV+DNGPG+      ++ E F+  
Sbjct: 317 QLRSAISNLVYNAVNHTPEGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRV 376

Query: 296 ----TTRSQGTGLGLAVVQMVCRAHGGRLELISKEGEGACFTMCIPLERQADSSN 346
               + ++ G+GLGLA+V+     H  RL + S  G+G  F+  IP    A +S+
Sbjct: 377 DKARSRQTGGSGLGLAIVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD 431