Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 747 a.a., nitrogen regulation protein ntrY from Caulobacter crescentus NA1000 Δfur

 Score = 94.7 bits (234), Expect = 7e-24
 Identities = 104/384 (27%), Positives = 167/384 (43%), Gaps = 72/384 (18%)

Query: 1   MMSSAVQEQHSHLDSLEDQVERYKQ----VLDVMPAGVILLDTQGIVREANPEAQRLLDV 56
           MM+S +Q Q + L +     E  +Q    VL  + AGV+ LD +G +   N  A  LL +
Sbjct: 372 MMTSELQLQQAALKAASLDAESRRQFIETVLSGVSAGVVSLDDRGKISAVNRRAVALLGL 431

Query: 57  PLVGEKWYSVIQIAFAP------------RDDDGHEISL-RNGRKVRLAISAS---TTGQ 100
           P   +    V  IA AP            R D   E+ + R G   RL + A+     G 
Sbjct: 432 P---DDALGVDLIALAPEFETVMTSLSESRPDTDVEVDIMREGETRRLRVRAAGHFAEGL 488

Query: 101 LILITDLTETRLLQSRISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANLA-------A 153
           ++   D+T       R+   QR ++   +   +AH+++ PL+   L A  L        A
Sbjct: 489 VLTFDDIT-------RLVAAQRNAAWKDVARRIAHEIKNPLTPIQLSAERLRRKYRKEIA 541

Query: 154 PNLPPATRERFQSKLVDRLHDLEKQVNDMLLFAKGGDNKVVMPFSIGDLAAEFMPMVETA 213
            +L   T +R    ++ ++ D+ + V++   FA+       MP      A  F P   T 
Sbjct: 542 SDLE--TFDRCTDTIIRQVGDIGRMVDEFSAFAR-------MP------APRFEPSNLTE 586

Query: 214 LKNNQI------DYGQEVESEE-----TMLLGNANALASALSNLVMNALQIAGKG----- 257
           +    +      D   EV  EE       +  +   +  AL+N++ NA +  G       
Sbjct: 587 MLRQAVFAQRFQDAEIEVRLEEPGDGDVWITSDERMVGQALTNILKNAGEAVGARRANEP 646

Query: 258 ---SQIDVFFRPVNGELKISVQDNGPGVPESLQHKIMEPFFTTRSQGTGLGLAVVQMVCR 314
               +I         EL ++V+DNG G+P   + ++ EP+ TTR +GTGLGLA+V+ +  
Sbjct: 647 ELQGRITATLVCEGDELCVTVEDNGVGLPAKDRDRLTEPYVTTREKGTGLGLAIVKRIME 706

Query: 315 AHGGRLELI-SKEGEGACFTMCIP 337
            HGG L L+ ++E  GA   M  P
Sbjct: 707 DHGGSLALVDAREPPGARVVMKFP 730