Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., sensory histidine kinase in two-component regulatory system with ZraR from Escherichia coli BL21

 Score =  112 bits (279), Expect = 2e-29
 Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 11/237 (4%)

Query: 107 LTETRLLQSRISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAPNLPPATRERFQ- 165
           L   +LLQ  +   ++L +LG + A +AH++R PLSS    A   A     PA  E  Q 
Sbjct: 219 LRSRQLLQDEMKRKEKLVALGHLAAGVAHEIRNPLSSIKGLAKYFA--ERAPAGGEAHQL 276

Query: 166 ----SKLVDRLHDLEKQVNDMLLFAKGGDNKVVMPFSIGDLAAEFMPMVETALKNNQIDY 221
               +K  DRL+   + V+++L   +   +  +    +  L    + +V     + +I  
Sbjct: 277 AQVMAKEADRLN---RVVSELLELVRP-THLALQAVDLNTLINHSLQLVSQDANSREIQL 332

Query: 222 GQEVESEETMLLGNANALASALSNLVMNALQIAGKGSQIDVFFRPVNGELKISVQDNGPG 281
                    ++  + + L   L NL +NA+Q  G+   I V        +KISV D+G G
Sbjct: 333 RFTANDTLPVIQADPDRLTQVLLNLYLNAIQAIGQHGVISVTASESGAGVKISVTDSGKG 392

Query: 282 VPESLQHKIMEPFFTTRSQGTGLGLAVVQMVCRAHGGRLELISKEGEGACFTMCIPL 338
           +       I  P+FTT+++GTGLGLAVV  +   HGG +++ S+EG+GA FT+C+P+
Sbjct: 393 IAAGQLEAIFTPYFTTKAEGTGLGLAVVHNIVEQHGGTIQVASQEGKGATFTLCLPV 449