Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 833 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score = 95.5 bits (236), Expect = 4e-24
 Identities = 70/247 (28%), Positives = 116/247 (46%), Gaps = 19/247 (7%)

Query: 108 TETRLLQSRISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAPNLPPATRERFQSK 167
           TE  +L+ R+   +RL ++G +   +AH+    L + + YA  +A   L  ++  R    
Sbjct: 451 TECDILERRLEHAERLQAVGTLAGGIAHEFNNILGAILGYA-EMAQNMLRRSSVTRRHID 509

Query: 168 LVDRLHDLEKQVNDMLLFAKGGDNKVVMPFSIGDLAAEFMPMVETALKNNQIDYGQEVES 227
            +    D  + + D +L       +V  PFS+ +L  E  P++  AL+ N I+   + + 
Sbjct: 510 QIISSGDRARLIIDQILTLSRKLERVTKPFSVSELVMEIAPLLRVALQRN-IELKFKFDD 568

Query: 228 EETMLLGNANALASALSNLVMNALQIAGKGSQIDVFFR---------------PVNGELK 272
           +++++ G+   +   L NL  NA Q      QID+                  P    + 
Sbjct: 569 KKSVVEGSPLEVQQMLMNLCKNASQAFTADGQIDIIVSRIFVSRQKVLAHGVMPAGDYVL 628

Query: 273 ISVQDNGPGVPESLQHKIMEPFFTTR--SQGTGLGLAVVQMVCRAHGGRLELISKEGEGA 330
           +SV D+G G+ E++   I EPFFTTR  S GTGLGLA V     A  G +++ S  G G 
Sbjct: 629 LSVSDDGEGIAETVLPHIFEPFFTTRSCSGGTGLGLAAVHGHVSALAGYIDVTSAVGRGT 688

Query: 331 CFTMCIP 337
            F + +P
Sbjct: 689 RFDIYLP 695