Pairwise Alignments

Query, 479 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., Transcriptional response regulatory protein GlrR from Variovorax sp. SCN45

 Score =  298 bits (764), Expect = 2e-85
 Identities = 165/375 (44%), Positives = 235/375 (62%), Gaps = 11/375 (2%)

Query: 1   MKMAQSKVLIVEDDEGLREALIDTLALAGYEWLEADCAEDALLKLKSHSVDIVVSDVQMA 60
           M    +++L+V+DD  +   L   L+ AGY+      AE AL +L+     +V+SDV++ 
Sbjct: 1   MSTTGARLLVVDDDPDMLRLLSMRLSSAGYQVTAVTSAETALTQLEIEHPQLVLSDVRLP 60

Query: 61  GMGGLALLRSIKQHWPNLPVLLMTAYANIQDAVSAMKDGAIDYMAKPFAPEVLLNMVSRY 120
           G  GL L   I++  P+LPV+L+TA+  I DAV A   G   Y+ KP+    LL+ +++ 
Sbjct: 61  GRDGLQLFDEIRKRHPSLPVILLTAHGTIPDAVEATARGVFTYLTKPYDGRELLDKIAQA 120

Query: 121 --------APVKSDDNG---DAVVADTKSLKLLALADKVAKTDANVMILGPSGSGKEVMS 169
                    P K+ D+    + V    +  +LLA A  VAK+DA+V++ G SG+GKE+++
Sbjct: 121 LALGAPATTPSKAGDDSWRSEIVSRSNRMAELLAEARMVAKSDASVLLRGDSGAGKELLA 180

Query: 170 RYIHNASPRKEGPFIAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILL 229
           R IH AS R + PF+A+NC AIP+ +LE+ LFG+ KGAFT A     G F+QA GGT+LL
Sbjct: 181 RAIHKASARADKPFVAVNCGAIPEALLESELFGHMKGAFTDAHANHKGLFQQADGGTLLL 240

Query: 230 DEISEMDLNLQAKLLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKQYVQAGHFREDLY 289
           DEI +M   LQ KLLRVLQER V  LG+ +SI++DVR+++ ++RDL   ++AG FREDLY
Sbjct: 241 DEIGDMPPALQVKLLRVLQERAVRPLGASQSIQVDVRIVSATHRDLDAAMEAGQFREDLY 300

Query: 290 YRLNVFPLTWPALCERKDDIEPLANHLIERHCKKLGLPVPSIAPNAITKLLNYPWPGNVR 349
           YRLNV  LT P L  R++DI  LANH ++R   K G  +   AP A+  L    WPGNVR
Sbjct: 301 YRLNVVTLTLPPLSARREDIPLLANHFLQRLSTKYGKRLSGFAPEALKALTTAAWPGNVR 360

Query: 350 ELDNVVQRALILSEN 364
           +L NVV++   LS +
Sbjct: 361 QLFNVVEQVCALSSS 375