Pairwise Alignments

Query, 479 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., sigma-54-dependent Fis family transcriptional regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  305 bits (782), Expect = 2e-87
 Identities = 170/414 (41%), Positives = 258/414 (62%), Gaps = 19/414 (4%)

Query: 6   SKVLIVEDDEGLREALIDTLALAGYEWLEADCAEDALLKLKSHS--VDIVVSDVQMAGMG 63
           S +L+++D+  LR+ L   L L GY+ L+A  A +    L++H+  V++V+SDV++    
Sbjct: 5   STLLLIDDENNLRQVLARVLELEGYQVLQAKNAREGFELLENHAEEVEVVLSDVKLPDDH 64

Query: 64  GLALLRSIKQHWPNLPVLLMTAYANIQDAVSAMKDGAIDYMAKPFAPEVLLNMVSRYAP- 122
           GL +LR +K+ +P   V+LMTA+  IQD VSAMK GA DY+ K    E L+  V+R A  
Sbjct: 65  GLNILRKVKEKYPLPEVILMTAFGTIQDGVSAMKQGAFDYLTKGENDEQLIVTVARAADK 124

Query: 123 -------------VKSDDNGDAVVADTKSLKLLA-LADKVAKTDANVMILGPSGSGKEVM 168
                        V++    D ++  T +LK    L  +VA TD+ V++ G +G GKE+ 
Sbjct: 125 ARLRKRVAELEKQVEAKFTLDTIIGHTPALKQAKELTARVAATDSTVLLEGETGVGKELF 184

Query: 169 SRYIHNASPRKEGPFIAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTIL 228
           ++ IH+ASPR+  PF+A+NC+A P ++LE+ +FGY+KGAFTGA+    G FE+A GGTI 
Sbjct: 185 AQAIHSASPRRSKPFVAVNCSAFPKDLLESEIFGYKKGAFTGAMADKKGLFEEANGGTIF 244

Query: 229 LDEISEMDLNLQAKLLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKQYVQAGHFREDL 288
           LDEI EM   LQAK LRVL+ +   +LG  K +K++VR++A +NRDL+   +A  FR DL
Sbjct: 245 LDEIGEMPPELQAKFLRVLETQSFTKLGDTKPVKVNVRIVAATNRDLQAEAEADRFRPDL 304

Query: 289 YYRLNVFPLTWPALCERKDDIEPLANHLIERHCKKLGLPVPSIAPNAITKLLNYPWPGNV 348
           YYRL+VF +  P L ER+ DI  LA H ++ +  K+   +  ++   I KL +YPW GN+
Sbjct: 305 YYRLSVFKIRVPTLRERQADIPLLAQHFLQLYNLKMNRRLEGMSEEFIQKLKHYPWKGNI 364

Query: 349 RELDNVVQRALILSENGHIQSEHILLEGVDWHDASSLQQAVAGESMAAPQIKPV 402
           REL NV++RA+IL++   +  EH+  E   W  A SL+ + +  S++  + K +
Sbjct: 365 RELKNVMERAVILADEEKLTPEHLPAE--FWTAAPSLEASESDTSLSTVERKHI 416