Pairwise Alignments

Query, 479 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., sigma-54-dependent Fis family transcriptional regulator from Magnetospirillum magneticum AMB-1

 Score =  310 bits (794), Expect = 7e-89
 Identities = 188/477 (39%), Positives = 279/477 (58%), Gaps = 38/477 (7%)

Query: 7   KVLIVEDDEGLREALIDTLALAGYEWLEADCAEDALLKLKSHSVDIVVSDVQMAGMGGLA 66
           ++LI+   +G   A        G +  +A+     L  L++   D+V+ DV+    G   
Sbjct: 2   RLLIIGTLDGQIGAASQIAMARGAKVRQAEDVPAGLEVLRAQGADLVMIDVKRDIKG--- 58

Query: 67  LLRSIKQHWPNLPVLLMTAYANIQDAVSAMKDGAIDYMAKPFAPEVLLNMVSRYAPVKSD 126
           L+ S++     +PV+     ++   AV A+K GA +Y+  P   E++  +++      + 
Sbjct: 59  LIDSLEAERIIVPVVACGIASDASAAVRAIKAGAKEYIPLPPDAELIAAVIAAV----TQ 114

Query: 127 DNGDAVVADTKSLKLLALADKVAKTDANVMILGPSGSGKEVMSRYIHNASPRKEGPFIAI 186
           +N + +  D +  + L LA++VA +DA++MI G SG+GKE+++R+IHN S R +  F+A+
Sbjct: 115 ENHNIIFKDPRMGQTLKLAEQVANSDASIMITGESGTGKELIARFIHNKSKRSDKRFVAV 174

Query: 187 NCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLDEISEMDLNLQAKLLRV 246
           NCAAIP+N+LE+ LFG+EKGAFTGAV    GKFE+AQGGT+LLDEISEMD+ LQ+KLLR 
Sbjct: 175 NCAAIPENLLESELFGHEKGAFTGAVARRIGKFEEAQGGTLLLDEISEMDVRLQSKLLRA 234

Query: 247 LQEREVERLGSRKSIKLDVRVLATSNRDLKQYVQAGHFREDLYYRLNVFPLTWPALCERK 306
           +QE+E++R+G  + +K+DVR+LATSNR ++  V+ G FREDLYYRLNV  L  PAL ER 
Sbjct: 235 IQEKEIDRVGGNQPVKVDVRILATSNRTMEDEVRKGTFREDLYYRLNVVTLALPALRERP 294

Query: 307 DDIEPLANHLIERHCKKLGLPVPSIAPNAITKLLNYPWPGNVRELDNVVQRALILSENGH 366
            DI  LA H ++R+ +  GLP   ++  A   L  + W GNVREL+N + RA++L+    
Sbjct: 295 LDIAVLAEHFVKRYTEANGLPTRQLSAEARQLLSRHHWRGNVRELENTMHRAVLLASGAE 354

Query: 367 IQSEHILLEGVDWHDASSLQQAVAGESMAAPQIKPVA-EPEVFKPLVQGGGQNSSSQSSG 425
           I  E ++L G                        PV   P+   P+V      ++S    
Sbjct: 355 IGPEAMILSG-----------------------NPVGTNPD---PMVAQAANAAASVIGA 388

Query: 426 LGG----ELRDQEFAIILDTLAECQGRRKEMAEKLGISPRTLRYKLAKMRDAGIDIP 478
            GG     + + E  +I+DTL+ C G R   A  LGIS RTLR KL +  D GID+P
Sbjct: 389 RGGMVGKTVAEVERDLIIDTLSHCLGNRTHAANILGISIRTLRNKLKQYSDEGIDVP 445