Pairwise Alignments

Query, 479 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., Putative sensory histidine kinase YfhA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  296 bits (758), Expect = 1e-84
 Identities = 162/395 (41%), Positives = 246/395 (62%), Gaps = 18/395 (4%)

Query: 8   VLIVEDDEGLREALIDTLALAGYEWLEADCAEDALLKLKSHSVDIVVSDVQMAGMGGLAL 67
           +L+V+DD GL + L   L   GY  + A+  ++ L  L    VD+V+SD++M  M G+ L
Sbjct: 9   LLLVDDDPGLLKLLGMRLTSEGYSVVTAESGQEGLRVLHREKVDLVISDLRMDEMDGMQL 68

Query: 68  LRSIKQHWPNLPVLLMTAYANIQDAVSAMKDGAIDYMAKPFAPEVLLNMVS----RYAPV 123
              I++  P +PV+++TA+ +I DAV+A + G   ++ KP   + L   +     + AP 
Sbjct: 69  FTEIQKVQPGMPVIILTAHGSIPDAVAATQKGVFSFLTKPIDRDALYKAIDEALEQSAPA 128

Query: 124 KSDDNGDAVVADTK-SLKLLALADKVAKTDANVMILGPSGSGKEVMSRYIHNASPRKEGP 182
             D   +A+V  +   L+LL  A  VA++D +V+I G SG+GKE+ ++ IHNASPR   P
Sbjct: 129 TDDSWRNAIVTRSPLMLRLLEQARMVAQSDVSVLINGQSGTGKEIFAQAIHNASPRSNKP 188

Query: 183 FIAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLDEISEMDLNLQAK 242
           F+AINC A+P+ +LE+ LFG+ +GAFTGAV    G F+ A+GGT+ LDEI +M   LQ K
Sbjct: 189 FVAINCGALPEQLLESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDMPAPLQVK 248

Query: 243 LLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKQYVQAGHFREDLYYRLNVFPLTWPAL 302
           LLRVLQER+V  LGS + I +DVR+++ ++RDL + +  G FREDLYYRLNV  L  PAL
Sbjct: 249 LLRVLQERKVRPLGSNRDIDIDVRIISATHRDLPKAMARGEFREDLYYRLNVVSLKIPAL 308

Query: 303 CERKDDIEPLANHLIERHCKKLGLPVPSIAPNAITKLLNYPWPGNVRELDNVVQRALILS 362
            ER +DI  LANHL+ +  ++    V + + +A+ +L+   WPGNVR+L NV+++ + L+
Sbjct: 309 AERTEDIPLLANHLLRQSAQRHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVIEQCVALT 368

Query: 363 ENGHIQSEHILLEGVDWHDASSLQQAVAGESMAAP 397
            +  I               + ++QA+ GE+ A P
Sbjct: 369 SSPVISD-------------ALVEQALEGENTALP 390