Pairwise Alignments

Query, 479 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  286 bits (733), Expect = 7e-82
 Identities = 161/368 (43%), Positives = 228/368 (61%), Gaps = 14/368 (3%)

Query: 7   KVLIVEDDEGLREALIDTLALAGYEWLEADCAEDALLKLKSHSVDIVVSDVQMAGMGGLA 66
           K+LI++D++ +R  L + L    YE  EA    + L K++S   D+V+ D++M  M GL 
Sbjct: 3   KILIIDDEKVIRSTLKEILEYEDYEIHEAQDGVEGLKKIESQDFDLVLCDIKMPKMDGLE 62

Query: 67  LLRSIKQHWPNLPVLLMTAYANIQDAVSAMKDGAIDYMAKPFAPEVLLNMVSRYAPVKSD 126
           +L  + Q       ++++A+ +I+ AV A K GA D++ KP     LL  V R A  K D
Sbjct: 63  VLDKVYQSDKQPQFIMISAHGSIESAVEATKKGAFDFIPKPPDLNRLLLTV-RNALEKKD 121

Query: 127 DNGDAVVADTKSLKLLALA-------------DKVAKTDANVMILGPSGSGKEVMSRYIH 173
              +  V   K  K L +              +KVA TDA V+I GP+G+GKE+++ ++H
Sbjct: 122 LVTETKVLKKKLSKKLDMVGESAAILQVKETIEKVAPTDARVLITGPNGTGKELVAHWLH 181

Query: 174 NASPRKEGPFIAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLDEIS 233
             S R + PFIA+NCAAIP  ++E+ LFG+EKGAFT A +   GKFEQA GGTI LDEI 
Sbjct: 182 QKSGRNKSPFIAVNCAAIPAELIESELFGHEKGAFTSANKQRQGKFEQANGGTIFLDEIG 241

Query: 234 EMDLNLQAKLLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKQYVQAGHFREDLYYRLN 293
           +M L+ QAK+LR LQE ++ R+G  K IK+DVRVLA +N+DLK+ ++  +FREDLY+RL+
Sbjct: 242 DMSLSAQAKVLRALQEHKISRVGGDKDIKIDVRVLAATNKDLKKEIEENNFREDLYHRLS 301

Query: 294 VFPLTWPALCERKDDIEPLANHLIERHCKKLGLPVPSIAPNAITKLLNYPWPGNVRELDN 353
           V  +  PAL +RK+DI  L +  +E   K+ G     I   AI KL  YPW GN+REL N
Sbjct: 302 VILIQVPALKDRKEDIPLLVDRFLEDIAKEYGTTKKDIDDKAIAKLQEYPWTGNIRELRN 361

Query: 354 VVQRALIL 361
           VV+R +IL
Sbjct: 362 VVERLIIL 369