Pairwise Alignments

Query, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

Subject, 572 a.a., flagellar M-ring protein FliF from Rhodanobacter sp000427505 FW510-R12

 Score =  239 bits (610), Expect = 2e-67
 Identities = 170/550 (30%), Positives = 269/550 (48%), Gaps = 37/550 (6%)

Query: 54  RQVVLVLSISICVALIVMLFFWVREPDMRPLGA-YETEELIPVLDYLDQQKQQYKL--DG 110
           RQ+VL+++++  VAL V +  W R P+   L A  E ++   +   L      Y+L  DG
Sbjct: 29  RQLVLLVAVAAAVALGVAVVLWSRGPNYGLLYAGLEQKDASAITQELQANNTPYRLSSDG 88

Query: 111 NTILVPVSDYNSLKLSMVRAGLNQNRQAGDEILMQDMGFGVSQRLEQERLKLSRERQLAK 170
           ++I+ P +D  +L+L +   GL Q   +   +   D  FG+S   E+ R +   E  L  
Sbjct: 89  SSIMAPAADLAALRLKLAAKGLPQGSASSSTLPAADSPFGMSDLAERTRYQQLLEADLGT 148

Query: 171 AIEEMRQVNKARVLLALPKQSVFVRHNQEASASVFLTVRTGANLKQEEIDAVVDMVASAV 230
            I  ++ V  ARV LALPK S F+R ++EASASV +T+  G  L   ++ A+V +VA++V
Sbjct: 149 TIGGLQSVRAARVHLALPKPSAFIRDSREASASVLVTLYPGRQLDAGQVAAIVHLVAASV 208

Query: 231 PGMKPSRVTVTDQHGRLLSSGSQDPVSAARRKEQELEKQQEEALRGKIDSVLIPILGLGN 290
           P ++  +V+V DQ G+LL++  + P  A       +  + E     +I+ +L P++G G 
Sbjct: 209 PNLEARQVSVIDQQGQLLTADPESP-GAVGDNRLRIATRIENTYAQRIEELLTPLVGPGR 267

Query: 291 YTAQVDIELDFSAVEQTRKVFDPNTPATRSEYTLEDYNNGNVVA--GVPGALSNQPPADA 348
             AQV  +LDFS  E+  + F  + PA RSE T  +       A  GVPGALSNQPP   
Sbjct: 268 VHAQVHADLDFSRTEKATETFGHDHPALRSEQTSSEQRGAGAAAAGGVPGALSNQPPVMV 327

Query: 349 SIP---------QDVAQMKDGSVMGQGSVHKEATRNYELDTTISHERKQSGVINRQTVAV 399
           + P            A     +    G     ATRNYELD TISH    +G + R TVAV
Sbjct: 328 AQPTAAKPDAGKASAAATATAATASPGESSGSATRNYELDRTISHVSDPAGRLARLTVAV 387

Query: 400 AVKSRSSV-----NPD--TGEVT----YTPLSEADLNSIRQVLIGTVGYSENRGDLLNVL 448
           A+  + +      NPD   G+        P S  +L  + ++    VG+   RGD ++V+
Sbjct: 388 ALDDKLAAAGKADNPDDPAGDAAAAPKSVPFSAQELQHLTELTKNAVGFDAARGDSVSVV 447

Query: 449 SMPFAE-PEMEQIVDVPIWEHPNFNDWVRWFASALVIIIVILVLVRPAMKKLINPAADND 507
           +  F   P ++ + + P+W  P   D ++  A  L+ ++V   L+RP +K L+       
Sbjct: 448 NQAFQRGPAVDALPETPLWGRPGVLDLLKQGAGVLIALLVAFGLLRPLLKGLLRGET--- 504

Query: 508 DQMYGPDGMPIGADGETSLIGSDIDGGELFEFGSGIDLPNLHKDEDVLKAVRALVANEPE 567
                   MP      +  +  ++   E    G    +P L  ++ V +A R +V    +
Sbjct: 505 ----ATRAMPSPMPQISVRVDDELAANEPARLGGA--MPTLSYEQRVGQA-RRMVGENSK 557

Query: 568 LAAQVVKNWM 577
             AQVV+NW+
Sbjct: 558 QVAQVVRNWV 567