Pairwise Alignments

Query, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., Flagellar M-ring protein FliF from Variovorax sp. SCN45

 Score =  107 bits (268), Expect = 9e-28
 Identities = 104/409 (25%), Positives = 186/409 (45%), Gaps = 38/409 (9%)

Query: 58  LVLSISICVALIVMLFFWVREPDMRPLGA-YETEELIPVLDYLDQQKQQYKL--DGNTIL 114
           LV  +   + +  +L +W+   + + L    + ++   +   L++ K  Y+L  +G +IL
Sbjct: 15  LVAGVLAIMLVTAILAWWLLHTEYQALFTDLKPQDAQAMTTELERLKVPYRLGDNGTSIL 74

Query: 115 VPVSDYNSLKLSMVRAGLNQNRQAGDEILMQDMGFGVSQRLEQERLKLSRERQLAKAIEE 174
           V  +  ++ ++ ++   L      G E L  +  FG+++  ++   + + + +L + I+ 
Sbjct: 75  VDKATVHATRIKLMGKELPLQGAVGLE-LFNNTDFGMTEFAQKINYQRALQGELIRTIQS 133

Query: 175 MRQVNKARVLLALPKQSVFVRHNQEASASVFLTVRTGANLKQEEIDAVVDMVASAVPGMK 234
           + +V + RVLLALP+Q +F +   +A AS+ LT+R G  L+ E++  V  +VA+AVPGM 
Sbjct: 134 LSEVREVRVLLALPEQGLFKQATSKAKASITLTMRQGQTLRPEQVTGVQRLVAAAVPGMA 193

Query: 235 PSRVTVTDQHGRLLS---SGSQDPVSAARRKEQELEKQQEEALRGKIDSVLIPILGLGNY 291
              VT+ D HG  L+   +   +  S+A R   +L++  E  L  K+ +VL    G G  
Sbjct: 194 TQDVTIVDGHGVALTRTDAAMGEADSSATR--LDLKRDTEAYLMRKVSAVLDRSFGSGQA 251

Query: 292 TAQVDIELDFSAVEQTRKVFDPNTPATRSEYTLEDYNNGNVVAGVPGALSNQPPADASIP 351
            A VD+ L+   +  T +  D    A+R+       + G VV         +   DA   
Sbjct: 252 LASVDVTLNMDQIRTTTE--DVLPAASRAGL----QSTGVVVR------ERESLRDAGPG 299

Query: 352 QDVAQMKDGSVMGQGSVHKEATRNYELDTTISHERKQSGVINRQTVAVAVKSRSSVNPDT 411
            D   +  G+  G GS  ++    Y +   +     Q G I R  V   V+         
Sbjct: 300 GDTKLIDTGAARG-GSAQRDV--EYAVGRRVEQVVSQPGSIRRVHVVAVVRK-------- 348

Query: 412 GEVTYTPLSEADLNSIRQVLIGTVGYSENRGDLLNVLSMPFAEPEMEQI 460
                  L  A    +R+V+   VG S  RGD + V S+  A   +E +
Sbjct: 349 ------ALDLAQEEQLRKVMAAAVGASFERGDTVVVQSLAGAASSVEGV 391