Pairwise Alignments

Query, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

Subject, 578 a.a., Flagellar M-ring protein FliF from Variovorax sp. SCN45

 Score =  204 bits (520), Expect = 6e-57
 Identities = 168/563 (29%), Positives = 266/563 (47%), Gaps = 63/563 (11%)

Query: 58  LVLSISICVALIVMLFFWVREPDMRPLGAYETE-ELIPVLDYLDQQKQQYKL--DGNTIL 114
           L++  +  VA       W R PD + L    ++ +   ++  L Q    YK    G  IL
Sbjct: 32  LIVGGAALVAAAAAFALWSRGPDYKVLYTNVSDRDGGAIIASLQQMNVPYKFAEGGGAIL 91

Query: 115 VPVSDYNSLKLSMVRAGLNQNRQAGDEILMQDMGFGVSQRLEQERLKLSRERQLAKAIEE 174
           +        +L +   GL +    G E LM +  FG SQ  EQ   +   E +LA++IE 
Sbjct: 92  IAGDKVAETRLKLAAQGLPKAGGVGFE-LMDNQKFGTSQFAEQVNYQRGLEGELARSIES 150

Query: 175 MRQVNKARVLLALPKQSVFVRHNQEASASVFLTVRTGANLKQEEIDAVVDMVASAVPGMK 234
           +  +  ARV LALPK S+FVR  ++ SASV L +  G ++ + ++ A+V MV+S+VP + 
Sbjct: 151 IGSIESARVHLALPKPSLFVRDQKKPSASVVLNLMRGRSIDEGQVSAIVHMVSSSVPDLD 210

Query: 235 PSRVTVTDQHGRLLSS--GSQDPVSAARRK-EQELEKQQEEALRGKIDSVLIPILGLGNY 291
              VTV DQ G LLSS  G+   +  ++ K  QE+E+        +I+++L PI+G  N 
Sbjct: 211 AKSVTVVDQRGNLLSSARGTDRGLDVSQLKYAQEIEQNYIR----RIEAILQPIVGANNV 266

Query: 292 TAQVDIELDFSAVEQTRKVFDPNTP----ATRSEYTLED-YNNGNVVAGVPGALSNQPPA 346
            AQV  E+DFS VE T + + PN      A RS+ + E   +NG    GVPGAL+NQPP 
Sbjct: 267 RAQVAAEIDFSVVEHTDEKYKPNQDPAQAAVRSQQSSESAQHNGAPPGGVPGALTNQPPV 326

Query: 347 DASIP---------------------------QDVAQMKDGSVMGQGSVHKEATRNYELD 379
           + + P                                   G+  G  S  K+ T NYELD
Sbjct: 327 NPTAPIVGPRAPNAPGTPPPGTPGAPGTPGAQGATTASTAGAATGPSSTRKDTTTNYELD 386

Query: 380 TTISHERKQSGVINRQTVAVAVKSRSSVNPDTGEVTYTPLSEADLNSIRQVLIGTVGYSE 439
            TI H ++ +G + R +VAV V +R + +   G+V    L+ A+L  IR +    +G+S+
Sbjct: 387 RTIRHVQQAAGGVKRLSVAVVVNNRDATDA-AGKVNSRALTPAELEQIRNLAKEAMGFSQ 445

Query: 440 NRGDLLNVLSMPFA-EPEMEQIVDVPIW---EHPNFNDWV-RWFASALVIIIVILVLVRP 494
           +RGD LNV++  FA + +     +VP W   E+      V ++   AL+ +   L ++RP
Sbjct: 446 DRGDSLNVVNSAFARDADSGPAPEVPFWRDRENIEIGKTVGQYLFYALLALFAWLAVLRP 505

Query: 495 AMKKLINPAADNDDQMYGPDGMPIGADGETSLIGSDIDGGELFEFGSGIDLPNLHKDEDV 554
             ++   PAA            P+    +   +  D++     E     +      D D 
Sbjct: 506 LTRRHA-PAAPT----------PVPVAEQEPAVEPDVNAQSAEESLREREANRKKADMDY 554

Query: 555 LKAVRALVANEPELAAQVVKNWM 577
                 +   +P+L A ++++WM
Sbjct: 555 ---AHQIGDKDPKLVAALIQHWM 574