Pairwise Alignments

Query, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., Flagellar M-ring protein from Pseudomonas putida KT2440

 Score =  284 bits (726), Expect = 8e-81
 Identities = 187/567 (32%), Positives = 305/567 (53%), Gaps = 45/567 (7%)

Query: 47  VGDLDLLRQVVLVLSISICVALIVMLFFWVREPDMRPL-GAYETEELIPVLDYLDQQKQQ 105
           +  + +LRQ+ L++ ++  VA+   +  W ++PD RPL G+    +   V+D L      
Sbjct: 31  ISQMPMLRQIGLLVGLAASVAIGFAVVLWSQQPDYRPLYGSLSGMDTKQVMDTLAAADIP 90

Query: 106 YKLDGNT--ILVPVSDYNSLKLSMVRAGLN-QNRQAGDEILMQDMGFGVSQRLEQERLKL 162
           Y ++ N+  +LV   D +  +L +  AG+   +   G E+L ++ G G SQ +E  R + 
Sbjct: 91  YNVEPNSGALLVKADDLSRARLKLAAAGVAPSDGNVGFELLDKEQGLGTSQFMEATRYRR 150

Query: 163 SRERQLAKAIEEMRQVNKARVLLALPKQSVFVRHNQEASASVFLTVRTGANLKQEEIDAV 222
           S E +LA+ +  +  V  ARV LA+PK SVFVR  ++ SASV + +  G  L+  ++ A+
Sbjct: 151 SLEGELARTVSSLNNVKAARVHLAIPKSSVFVRDERKPSASVLVELYPGRALEAGQVMAI 210

Query: 223 VDMVASAVPGMKPSRVTVTDQHGRLLSSGSQDPVSAARRKEQELEKQQEEALRGKIDSVL 282
           V++VA++VP +  S+VTV DQ G LLS   QD       K+ +  ++ E  L  ++ ++L
Sbjct: 211 VNLVATSVPELDKSQVTVVDQKGNLLSEQIQDSALTQAGKQFDYSRRVESMLTQRVHNIL 270

Query: 283 IPILGLGNYTAQVDIELDFSAVEQTRKVFDPNTPATRSEYTLEDYN-NGNVVAGVPGALS 341
            P+LG   Y A+V  +LDFSAVE T + F+P+ PA RSE ++++   +     GVPGALS
Sbjct: 271 QPVLGNDRYKAEVSADLDFSAVESTSEQFNPDQPALRSEQSVDEQRASSQGPQGVPGALS 330

Query: 342 NQPPADASIPQ-------DVAQMKDGSVM----GQ----------------GSVHKEATR 374
           NQPP  AS PQ         A ++ G  +    GQ                    +++T+
Sbjct: 331 NQPPGAASAPQTTGGAATPAAAIQPGQPLVDANGQQIMDPATGQPMLAPYPSDKRQQSTK 390

Query: 375 NYELDTTISHERKQSGVINRQTVAVAVKSRSSVNPDTGEVTYTPLSEADLNSIRQVLIGT 434
           N+ELD +ISH R+Q G + R +VAV V  +  ++P TG+ T  P    DL    +++   
Sbjct: 391 NFELDRSISHTRQQQGRMARLSVAVVVDDQVKIDPATGDTTRAPWGAEDLARFTRLVQDA 450

Query: 435 VGYSENRGDLLNVLSMPFAEPEMEQIVDVPIWEHPNFNDWVRWFASALVIIIVILVLVRP 494
           VG+  +RGD + V+++PFA    E+I D+  ++ P F D V+     + I++++  ++RP
Sbjct: 451 VGFDASRGDSVTVINVPFAADRGEEIADIAFYQQPWFWDIVKQVLGVVFILVLVFGVLRP 510

Query: 495 AMKKLI---NPAADNDDQMYGPDGMPIGADGETSLIGSDIDGGELFEFGSGIDLPNLHKD 551
            +  +      AA + D   G  GM +G DGE +     + G       + I LP+  + 
Sbjct: 511 VLNNITGGGKQAAPDSDMELG--GM-MGLDGELANDRVSLGG------PTSILLPSPSEG 561

Query: 552 -EDVLKAVRALVANEPELAAQVVKNWM 577
            E  L A++ LVA +P   AQVVK+W+
Sbjct: 562 YEAQLNAIKGLVAEDPGRVAQVVKDWI 588