Pairwise Alignments

Query, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., flagellar M-ring protein FliF from Magnetospirillum magneticum AMB-1

 Score =  169 bits (427), Expect = 4e-46
 Identities = 135/540 (25%), Positives = 238/540 (44%), Gaps = 45/540 (8%)

Query: 66  VALIVMLFFWVREPDMRPL-GAYETEELIPVLDYLDQQKQQYKL--DGNTILVPVSDYNS 122
           +   + L   V  P M  L G  +  +   +++ L   K  Y+L  DG  + VP      
Sbjct: 27  LGFFIYLMSRVAAPQMELLYGDLDLGDSKQIIEKLTADKIPYELRKDGTEVWVPKDRKLD 86

Query: 123 LKLSMVRAGLNQN-RQAGDEILMQDMGFGVSQRLEQERLKLSRERQLAKAIEEMRQVNKA 181
           L++ M    L    R AG E+  +    G +   +   +  + E +L+K I  + +V  A
Sbjct: 87  LRVRMAEQALPAGGRMAGYELFDKQDALGSTSFQQNITMVRALEGELSKTIRSIDRVKAA 146

Query: 182 RVLLALPKQSVFVRHNQEASASVFLTVRTGANLKQEEIDAVVDMVASAVPGMKPSRVTVT 241
           RV L LPK+  F R  QE SASV + +     L + ++ A+  ++A+AVP MKPSR+++ 
Sbjct: 147 RVHLVLPKREAFSRDTQEPSASVIIKMNGAQRLDKGQVSAIQHLIAAAVPKMKPSRISIV 206

Query: 242 DQHGRLLSSGSQDPVSAARRKEQELEKQQEEALRGKIDSVLIPILGLGNYTAQVDIELDF 301
           D  G LL+ G ++      +  +E++ + E  L   I+ +L   LG G   A+V +++D 
Sbjct: 207 DDKGTLLAKGFENSKEYQAQTAEEMKVKTEAKLVKTIEDLLERSLGPGRVRAEVTVDMDM 266

Query: 302 SAVEQTRKVFDPNTPATRSEYTLEDYNNGNVVAGVPGAL-SNQPPADASIPQDVAQMKDG 360
           S    T + FDP T   RS+ T+ +          P  +  N P  +AS          G
Sbjct: 267 SQATTTEETFDPETKVVRSQVTVNEGEQSQDAEPTPVTVQQNLPDPNAS--------SSG 318

Query: 361 SVMGQGSVHK-EATRNYELDTTISHERKQSGVINRQTVAVAVKSRSSVNPDTGEVTYTPL 419
           ++     ++K + T NYE+        ++ G I + + AV V      + D  + +Y   
Sbjct: 319 NIRTSTKINKNQETVNYEISRKTKSTVREMGEIRKVSAAVIVDGVREQSADGKQTSYRER 378

Query: 420 SEADLNSIRQVLIGTVGYSENRGDLLNVLSMPFAE-PEMEQIVDVPIWEHPNFNDWVRWF 478
           +  +L+ I  ++   +GY+++R D + V SMPF +  E+ Q  +   +      D+V   
Sbjct: 379 TAEELSQIEALVKSAIGYTKDRDDQVKVASMPFYKGEELLQAEEPGEFIFGMRRDFVEKI 438

Query: 479 ASALVIIIVILVLVRPAMKKLINPAADNDDQMYGPDG---------------------MP 517
           AS L + +V ++ +   ++ LI+ A ++     GPDG                     MP
Sbjct: 439 ASNLGLSVVAILFLLLVLRPLISRAIESMQGQVGPDGRRLLTTDGGAMPQLTGPGAAAMP 498

Query: 518 IGADGETSLIGSDIDGGELFEFGSGIDLPNLHKDEDVLKAVRALVANEPELAAQVVKNWM 577
               GE  +I  ++           ID          ++ +  +V   PE A  +++NW+
Sbjct: 499 APLGGEEEVIADEL---------IDIDKVEGRVKASSIRKIGEIVEKHPEEALSIIRNWL 549