Pairwise Alignments

Query, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., flagellar basal-body MS-ring/collar protein FliF from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  154 bits (389), Expect = 9e-42
 Identities = 133/542 (24%), Positives = 242/542 (44%), Gaps = 32/542 (5%)

Query: 57  VLVLSISICVALIVMLFFWVREPDMRPLGAYETEELIPVLDYLDQQKQQY--KLDGNTIL 114
           VL ++  +   L+ ++    + PD       +  E   +   LDQ   +Y  K DG+TI+
Sbjct: 19  VLGVAAGVAAVLVAVMLRMGQAPDALLYSNLDLREASEISAALDQAGIKYSSKGDGSTIM 78

Query: 115 VPVSDYNSLKLSMVRAGLNQNRQAGDEILMQDMGFGVSQRLEQERLKLSRERQLAKAIEE 174
           V   +  + ++ +   GL  +   G E+       G ++  +Q   + + + +L++ I  
Sbjct: 79  VNRDEVGTARMLVAGKGLVTSGSVGYELFDTQSVLGQTEFQQQLNEQRALQGELSRTIMS 138

Query: 175 MRQVNKARVLLALPKQSVFVRHNQEASASVFLTVRTGANLKQEEIDAVVDMVASAVPGMK 234
           MR +  ARV + +P++ +F     E +A+V + +  G +L  +++ A+ ++VAS+VP +K
Sbjct: 139 MRGITAARVHITMPRREMFTSAAGEPTAAVLVGLG-GRDLTSDQVRAIRNLVASSVPNLK 197

Query: 235 PSRVTVTDQHGRLLSSGSQDPVSAARRKEQELEKQQEEALRGKIDSVLIPILGLGNYTAQ 294
           P RVTV DQ  R L++GS D    +     E +   E  L+ +I  ++  ++G G    Q
Sbjct: 198 PDRVTVADQTNRTLAAGSDDGTFTS-ASAAEAKGNTESQLQARIKDIVEGVVGAGAARVQ 256

Query: 295 VDIELDFSAVEQTRKVFDPNTPATRSEYTLEDYNNGNVVAGVPGALSNQPPADASIPQDV 354
           V  ++D S      + FDP+    RS  T     NG+  A           A  +IP   
Sbjct: 257 VTADIDQSRATTQEEKFDPDGQVVRSTTT-----NGSQSADNSAQPDGGVTATNNIPGGA 311

Query: 355 AQMKDGSVMGQGSVHKEATRNYELDTTISHERKQSGVINRQTVAVAVKSRSSVNPD-TGE 413
           A     +  G  +     T NYE+  T +   K+ G + +  VAVAV  + +   D  GE
Sbjct: 312 A--PGATPAGSTNSENAETTNYEISKTTTTTTKEPGEVKKLAVAVAVDGKWTPAKDGKGE 369

Query: 414 VTYTPLSEADLNSIRQVLIGTVGYSENRGDLLNVLSMPF-----AEPEMEQIVDVPIWEH 468
            TY P +  ++  I+ ++    G  E RGD + V+++ F      E  ++    +  +  
Sbjct: 370 PTYAPRTAEEIAQIKSLVAAAAGIDETRGDKIEVINVRFNHDTGIEGGLDGKSSLLDFSK 429

Query: 469 PNFNDWVRWFASALVIIIVILVLVRPAMKKLINPAADNDDQMYGPDGMP--------IGA 520
            +   +V      +V +++I  ++RP +K      A N   + G +G+P        IG 
Sbjct: 430 NDIMRFVELGILTVVALLLIFFVLRPLLKTAAGGGA-NLPALAGANGVPVTTVATTVIGP 488

Query: 521 DGETSLIGSDIDGGELFEFGSGIDLPNLHKD--EDVLKAVRALVANEPELAAQVVKNWMQ 578
           DG+  L+          E    ID+  +        +K V   V + P+ AA +++ W+ 
Sbjct: 489 DGQPQLVQLPAPS----EMEQKIDIARIEGQVKASSVKKVADFVQSHPDDAAGILRTWVA 544

Query: 579 NG 580
            G
Sbjct: 545 EG 546