Pairwise Alignments

Query, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., Flagellar M-ring protein from Azospirillum sp. SherDot2

 Score =  189 bits (479), Expect = 3e-52
 Identities = 138/536 (25%), Positives = 238/536 (44%), Gaps = 33/536 (6%)

Query: 64  ICVALIVMLFFWVREPDMRPL-GAYETEELIPVLDYLDQQKQQYKLD--GNTILVPVSDY 120
           + +   V L   +  P+M  L    +  E   +   LD+ K  Y +D  G  I+VP    
Sbjct: 25  LLIGFFVYLTTRLSTPEMELLYSELQQTEAAAIAKKLDEAKVPYTVDKSGTKIMVPADQV 84

Query: 121 NSLKLSMVRAGLNQNRQAGDEILMQDMGFGVSQRLEQERLKLSRERQLAKAIEEMRQVNK 180
             +++ M   GL      G E+  +  GFG +  ++      + E ++A+ ++ +  V +
Sbjct: 85  GPMRMRMAAQGLPSGGSVGYELFDKGEGFGATSFMQNINHLRALEGEMARTVQTLNGVQQ 144

Query: 181 ARVLLALPKQSVFVRHNQEASASVFLTVRTGANLKQEEIDAVVDMVASAVPGMKPSRVTV 240
           ARV L LPK+ +F R    A+ASVFL +R G  L +E I A+  ++A++VP + P R+++
Sbjct: 145 ARVHLVLPKRELFARQQNPATASVFLKLRPGTQLSRENIQAIQQLIAASVPNLDPGRISI 204

Query: 241 TDQHGRLLSSGS-QDPVSAARRKEQELEKQQEEALRGKIDSVLIPILGLGNYTAQVDIEL 299
            D  G+LL+ G+  D   A      E ++  E  L   ++ +L   LG G   A+V  +L
Sbjct: 205 VDDKGKLLARGTGNDSAEAMAANADEKKQAYEGRLARTVEDLLGRTLGYGKVRAEVSADL 264

Query: 300 DFSAVEQTRKVFDPNTPATRSEYTLEDYNNGNVVAGVPGALSNQPP-----ADASIPQDV 354
           DF  +    ++FDP +   RS  T+ + +            S++ P      D ++P   
Sbjct: 265 DFDRITTQSEIFDPESQVVRSTQTVAESSES----------SDRDPLAPVTVDQNLPTAQ 314

Query: 355 AQMKDGSVMGQGSVHKEATRNYELDTTISHERKQSGVINRQTVAVAVKSRSSVNPDTGEV 414
           A      +    S   E T NYE+  T     +++G + R +VAV V     ++ D    
Sbjct: 315 ASSSASPLSSNKSNRNEETINYEITKTTKSHVREAGQVRRLSVAVLVDGTYQLSKD-APP 373

Query: 415 TYTPLSEADLNSIRQVLIGTVGYSENRGDLLNVLSMPFAEPEMEQIVDVPIWEHPNFNDW 474
            Y P SE ++ SI+ ++   VG    RGD L V++M F  PE +      ++     +D 
Sbjct: 374 AYQPRSEQEIESIKALVRSAVGLDAVRGDSLEVINMRFWSPEDDIQKPEELFMGMTKDDL 433

Query: 475 VR---WFASALVIIIVILVLVRPAMKKLINPAA-----DNDDQMYGPDGMPIGADGETSL 526
            R        +V +++IL+++RP + +    A      + D  +    GMP      T  
Sbjct: 434 FRIAEMVVLGIVAVLIILLVIRPLISRAFEKAEMQEEDEMDRLLTDQAGMPAALAAPTGA 493

Query: 527 IGSDI-----DGGELFEFGSGIDLPNLHKDEDVLKAVRALVANEPELAAQVVKNWM 577
           +  D+        E  E    I+          L+ V  +V   PE A  +++NW+
Sbjct: 494 LAQDLALEAAQADEELEQMIDINRVEGRVRASSLRKVGEIVDKHPEEAVSILRNWL 549