Pairwise Alignments

Query, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

Subject, 566 a.a., flagellar M-ring protein from Agrobacterium fabrum C58

 Score =  137 bits (346), Expect = 9e-37
 Identities = 123/493 (24%), Positives = 223/493 (45%), Gaps = 34/493 (6%)

Query: 105 QYKLDGNTILVPVSDYNSLKLSMVRAGLNQNRQAGDEILMQDMGFGVSQRLEQERLKLSR 164
           Q   DG+++ VPV   +  +L +   GL  +  AG E+       G++  +++     + 
Sbjct: 81  QVGTDGSSLQVPVGLTSKARLLLAERGLPDSANAGYELFDNVGSLGLTSFMQEVTRVRAL 140

Query: 165 ERQLAKAIEEMRQVNKARVLLALPKQSVFVRHNQEASASVFLTVRTGANLKQEEIDAVVD 224
           E ++ ++I+++  V+ ARV + LP    F R  Q+ +ASV   +R  A+  ++   ++  
Sbjct: 141 EGEIGRSIQQIDGVSAARVHIVLPDVGNFRRGEQKPTASVM--IRASASAGRKASASIRH 198

Query: 225 MVASAVPGMKPSRVTVTDQHGRLLSSGSQDPVSAARRKEQELEKQQEEALRGKIDSVLIP 284
           +VASAVPG++   VT+ D  G+LL+SG  D  +AA  +   L +  ++ +   ID  L P
Sbjct: 199 LVASAVPGLEVDDVTLLDSTGQLLASG-DDVTNAAMNRSLTLAQNVQQEITTNIDKALAP 257

Query: 285 ILGLGNYTAQVDIELDFSAVEQTRKVFDPNTPATRSEYTLEDYNNGNVVAGVPGALSNQP 344
            LG+ N+ + V  +++  + +    V+DP +   RS  T+++                QP
Sbjct: 258 FLGIDNFRSSVTAQINTDSRQVQETVYDPESRVERSVRTVKEDQKSQ---------ETQP 308

Query: 345 PADASIPQDVAQMK-----DGSVMGQGSVHKEATRNYELDTTISHERKQSGVINRQTVAV 399
              A++ Q+V Q        G      S  KE   NYE+++      K    + + +VAV
Sbjct: 309 DTAATVEQNVPQAAPQGGGGGPQSSDQSAKKEEQTNYEINSKTVATVKNGYTLEKISVAV 368

Query: 400 AVKSRSSVNPDTGEVTYTPLSEADLNSIRQVLIGTVGYSENRGDLLNVLSMPFAEPEM-- 457
            V ++  +    GE       +A L  +++++    G S +RGD++ + +M F E ++  
Sbjct: 369 VV-NKGRIAKMVGEPADQAKIDAYLAEMQKIVTSAAGISSDRGDIVTLTAMDFLETQLLD 427

Query: 458 EQIVDVPIWE--HPNFNDWVRWFASALVIIIVILVLVRPAMKKLI---NPAADNDDQMYG 512
           E      + E    N    +   A   V  +V+ + VRP ++ +    + AA    +  G
Sbjct: 428 EAASGPGVMEVLSRNSAGIINSLAFVAVAFLVVWLGVRPLVRTVTANGSAAAQLSQESAG 487

Query: 513 ---PD---GMPIGADGETSLIGSDI---DGGELFEFGSGIDLPNLHKDEDVLKAVRALVA 563
              PD   GM  GA G     G+D       +L   G G    N    E   + +  +V 
Sbjct: 488 LELPDFSPGMEAGAGGLMEGFGADFGFDSTDDLLAGGDGEGTFNRRVREGPERRLSRMVE 547

Query: 564 NEPELAAQVVKNW 576
              E AA++++ W
Sbjct: 548 ISEERAAKILRKW 560