Pairwise Alignments

Query, 348 a.a., flagellar motor switch protein FliG from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., Flagellar motor switch protein FliG from Variovorax sp. SCN45

 Score =  242 bits (618), Expect = 9e-69
 Identities = 132/328 (40%), Positives = 216/328 (65%), Gaps = 3/328 (0%)

Query: 23  GEEKAAILLLSLNEEDAAGIIRHLEPKQVQRVGSAMARAKDLSQTKVSAVHRAFLEDIQK 82
           G  K+AILL++L E+ AA  +  L   +VQ +G AM++   +S+ +++AV   F E+ ++
Sbjct: 6   GTRKSAILLMALGEDRAAAALHQLPTSEVQALGLAMSKLTSVSKEELAAVLAEFREETEQ 65

Query: 83  YTNIGMGSEDFLRNALVAALGADKANNLVDQILLGTGSKG-LDSLKWMDPRQVASIIINE 141
            + + +GS  ++R  L  ALG D+A+NL++ IL     +G ++ L  ++  +VA +I +E
Sbjct: 66  LSALHLGSTSYIRAVLKKALGDDRASNLLEDILQPDEPRGGIERLNELEAGEVAELIRDE 125

Query: 142 HPQIQTIVLSYLEPDQSAEILAQFAQRDALDLLMRIANLEEVQPSALAELNEIMEKQFAG 201
           HPQI   ++ +L+  +++E+L +   R   D++MR+A L  VQPSAL EL +++ +  AG
Sbjct: 126 HPQILATLVVHLDRMKASEVLEKLPTRLRHDVIMRVATLGGVQPSALKELTDVLTEMLAG 185

Query: 202 QAGAQAAKIGGLKAAADIMNYLDNNIESVLMEGMREKDEDLATQIQDLMFVFENLVEVDD 261
           Q G +  ++GG++ AA+I+N +   +E   +  +REKDE LA +I D MFVFENL+ ++D
Sbjct: 186 Q-GVRRNRLGGVRTAAEIVNLMSTAVEEEAIAHVREKDEALAQRIVDEMFVFENLLGLED 244

Query: 262 QGIQKLLRDVPQDVLQKALKGADDTLREKIFKNMSKRAAEMMKDDLEAMPPIKVSDVEAA 321
           + IQ+LL+D+  D L  ALKGA   LR+K   NMS+RAAE +++D+E   P++VS VE  
Sbjct: 245 RSIQRLLKDIESDSLIIALKGAPMELRDKFLNNMSQRAAETLREDMELRGPVRVSQVETE 304

Query: 322 QKEILSIARRMADNGEIMLGG-GADEFL 348
           QK IL +ARR+A+ GEI++   G D+F+
Sbjct: 305 QKAILQVARRLAEAGEIVIAAPGTDDFV 332