Pairwise Alignments

Query, 270 a.a., flagellar assembly protein FliH from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., flagellar biosynthesis; export of flagellar proteins? (VIMSS) from Escherichia coli BW25113

 Score = 73.9 bits (180), Expect = 3e-18
 Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 11/213 (5%)

Query: 52  WIPNFDEPEQVVEHEFSEEEIALIRTA--AQQEGFEAGQAEGYQQGFEQGKAEGFQAGHQ 109
           W P+   P Q       E E  +I  A  + ++     Q + ++QG++ G AEG Q GH+
Sbjct: 10  WTPDDLAPPQAEFVPIVEPEETIIEEAEPSLEQQLAQLQMQAHEQGYQAGIAEGRQQGHK 69

Query: 110 EGQTQGYQDGVAEGQALIQEQVKTFMA----LANQFAQPLDLLNAQVEKQLVDMVLALTK 165
           +G  +G   G+ +G A  + Q     A    L ++F   LD L++ +  +L+ M L   +
Sbjct: 70  QGYQEGLAQGLEQGLAEAKSQQAPIHARMQQLVSEFQTTLDALDSVIASRLMQMALEAAR 129

Query: 166 EVVHVEVQTNPQVILDTVKASVEALPIAGHAITLKLNPEDVEIIRQAYGEQEIETRNWTL 225
           +V+      +   ++  ++  ++  P+      L+++P+D++ +    G   +    W L
Sbjct: 130 QVIGQTPTVDNSALIKQIQQLLQQEPLFSGKPQLRVHPDDLQRVDDMLG-ATLSLHGWRL 188

Query: 226 LSEPALSRGDVQIEAGE----SSVSYRMEERIR 254
             +P L  G  ++ A E    +SV+ R +E  R
Sbjct: 189 RGDPTLHPGGCKVSADEGDLDASVATRWQELCR 221