Pairwise Alignments

Query, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., putative secretion system apparatus ATP synthase SsaN from Xanthobacter sp. DMC5

 Score =  277 bits (708), Expect = 6e-79
 Identities = 161/411 (39%), Positives = 236/411 (57%), Gaps = 18/411 (4%)

Query: 21  MASGKLVRVVGLTLEATGCKAPVGSLCKVETM---------NGEMEAEVVGFSGDNLFLM 71
           M    LVRV G+  E       V  L    T+         +G    EVV        + 
Sbjct: 25  MEEHPLVRVGGIVREVAPTHVRVSGLSSFVTLGERVGFEQASGTSIGEVVRIDAAGAVVK 84

Query: 72  PSEQIIGV---LPGAKVTPITTESGLPVGMELLGRVIDGVGNPLDGLGPI-YTDQRASLN 127
           P ++ + V    P  ++ P+     L       GRVID +G PLD   P+ +  +R  L+
Sbjct: 85  PFDERVSVGIGTPAFRIGPLA----LSPDRSWKGRVIDALGRPLDKPEPLAHGPRRMPLD 140

Query: 128 AIPINPLARKPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTTAQV 187
           + P   +AR  ++ PL  G++A++    + +GQRIG+FAGSGVGKS  L M  R      
Sbjct: 141 SEPPPAMARGRVHRPLVTGVRAVDIFTPICEGQRIGIFAGSGVGKSTLLSMFARSAGFDT 200

Query: 188 VVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTALTIAEYFRDQ 247
           VVV L+GERGREV+EF+E  L    R R+VV+ + +D SP+MR    Q AL +AEYFR+ 
Sbjct: 201 VVVALVGERGREVREFLEGPLAAS-RDRAVVIVSTSDQSPMMRRLAPQAALAVAEYFRNA 259

Query: 248 GLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGGPHQGSIT 307
           G  VLL++DS+TR+A A R++AL+ GEP   +GY PSVF+ LP L+ERAG G   +G+IT
Sbjct: 260 GESVLLIVDSVTRYAHAARDVALAAGEPAVARGYAPSVFSTLPKLLERAGPGMEGEGAIT 319

Query: 308 AFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVMPQITTDE 367
             F+VL +GDD  DP+ADA R  LDGHIVL R +AD G +PAI++  S+SR+  ++ ++ 
Sbjct: 320 GIFSVLVDGDDHNDPVADAIRGTLDGHIVLDRAIADQGRFPAINLLGSISRLAGEVWSEP 379

Query: 368 HLLMSKAVRQILSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQQ 418
              + + ++ +++      DL  +G Y+PG D  +D A  + P++   L+Q
Sbjct: 380 ERDLVRRLKAMIARFEDTSDLRLMGGYQPGADGELDQAVAIVPRIYDALRQ 430