Pairwise Alignments

Query, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., ATP synthase from Pseudomonas simiae WCS417

 Score =  489 bits (1260), Expect = e-143
 Identities = 249/427 (58%), Positives = 320/427 (74%), Gaps = 5/427 (1%)

Query: 3   ALADRLAQYKVEGHTT-RPMASGKLVRVVGLTLEATGCKAPVGSLCKVETMNG----EME 57
           + A RL+ Y        +P+  G+L+R+VGLTLEA G +A +GS C V   +     ++E
Sbjct: 7   SFAKRLSGYAEAAELPGQPILEGRLLRMVGLTLEAEGLRAAMGSRCMVINDDSYHPVQVE 66

Query: 58  AEVVGFSGDNLFLMPSEQIIGVLPGAKVTPITTESGLPVGMELLGRVIDGVGNPLDGLGP 117
           AEV+GFSG  +FLMP   + G+ PGA+V P+     LP+GM +LGRV+DG G  LDG G 
Sbjct: 67  AEVMGFSGSKIFLMPVGSLAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRALDGKGG 126

Query: 118 IYTDQRASLNAIPINPLARKPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177
           +  +    ++   INPL R PI+ PLDVGI++INGLLTVG+GQR+GLFAG+GVGKSV LG
Sbjct: 127 MKAEDWVPMDGPTINPLNRNPISVPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLG 186

Query: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTA 237
           MMTR T A ++VVGLIGERGREVKEFIE  LG +G +RSVVVA+PAD +PLMRL+     
Sbjct: 187 MMTRFTEADIIVVGLIGERGREVKEFIEHSLGEEGLKRSVVVASPADDAPLMRLRAAMYC 246

Query: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297
             IAEYFRD+G +VLLLMDSLTRFAQAQREIAL++GEPPATKGYPPSVFAKLP LVERAG
Sbjct: 247 TRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAG 306

Query: 298 NGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357
           N     GSITAF+TVL+EGDD QDPIAD++R +LDGHIVLSR +A+ GHYPAID+E S+S
Sbjct: 307 NAEAGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASIS 366

Query: 358 RVMPQITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQ 417
           RVMP + T EH++ ++  +Q+ S  ++++DL+S+GAY  G D+  D A  L+P+L  YL+
Sbjct: 367 RVMPAVVTPEHMIRAQQFKQLWSRYQQSRDLISVGAYVAGGDRDTDLAIALQPQLVTYLR 426

Query: 418 QAMKETV 424
           Q + + +
Sbjct: 427 QGLNDKI 433