Pairwise Alignments

Query, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., Flagellum-specific ATP synthase FliI from Variovorax sp. SCN45

 Score =  493 bits (1268), Expect = e-144
 Identities = 261/455 (57%), Positives = 329/455 (72%), Gaps = 22/455 (4%)

Query: 7   RLAQYKVEGHTTR---PMASGKLVRVVGLTLEATGCKAPVGSLCKVETMNGEM----EAE 59
           R A  K  G+  R     ASG+L R VGL LEA G + PVGS C +E   G      EAE
Sbjct: 15  RAALEKARGNVARCETTTASGRLTRAVGLVLEAVGLQLPVGSDCLIELPPGNAQRYAEAE 74

Query: 60  VVGFSGDNLFLMPSEQIIGVLPGAKV--TPITTESG---------LPVGMELLGRVIDGV 108
           VVGF+GD LFLM   ++ G+LPGA+V   P   E G         LPVG  +LGRV+D  
Sbjct: 75  VVGFAGDRLFLMSQTEVAGLLPGARVFARPGALEPGASGDAHTKRLPVGEGMLGRVVDAA 134

Query: 109 GNPLDGLGPIYTDQRASLNAIPINPLARKPINEPLDVGIKAINGLLTVGKGQRIGLFAGS 168
           G PLDGLGP+   ++  L++ PINPL+R PI+  LDVG++AIN +LTVG+GQR+GLFAGS
Sbjct: 135 GRPLDGLGPLDVARKVPLSSPPINPLSRAPIDSVLDVGVRAINAMLTVGRGQRMGLFAGS 194

Query: 169 GVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPL 228
           GVGKSV LGMM R T+A+V+VVGLIGERGREVK+FIE  LG +G  R+VVVAAPAD+SPL
Sbjct: 195 GVGKSVLLGMMARYTSAEVIVVGLIGERGREVKDFIENTLGEEGLARAVVVAAPADNSPL 254

Query: 229 MRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAK 288
           +RL+G   A  +AEYFRD+G DVLL+MDSLTR+A AQREIAL+VGEPPATKGYPPSVFA+
Sbjct: 255 LRLQGAAYATCLAEYFRDRGKDVLLIMDSLTRYAMAQREIALAVGEPPATKGYPPSVFAR 314

Query: 289 LPALVERAGNGG----PHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADA 344
           LPALVERAGNG        GSITAF+TVL+EGDD QDPIAD++RAILDGH+VLSR +A+A
Sbjct: 315 LPALVERAGNGSRDAQGRGGSITAFYTVLSEGDDQQDPIADSARAILDGHVVLSRTLAEA 374

Query: 345 GHYPAIDVEKSVSRVMPQITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTDKAIDA 404
           GHYPAID+E S+SR M  +       + +  +Q+LS  ++N+DL+S+GAY PG D  +D 
Sbjct: 375 GHYPAIDIEASISRAMTALIPSSQFDVVRRFKQMLSRYQRNRDLISVGAYAPGHDLQLDK 434

Query: 405 AFTLKPKLDQYLQQAMKETVPYDMCVNMLRHVLSS 439
           A  + P+++ +LQQ+M E   Y+  +  L H+  +
Sbjct: 435 AIAMYPRIEAFLQQSMDERTGYEDAIAQLEHLFEA 469