Pairwise Alignments

Query, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., type III secretion system ATPase SctN from Paraburkholderia sabiae LMG 24235

 Score =  348 bits (894), Expect = e-100
 Identities = 187/398 (46%), Positives = 255/398 (64%), Gaps = 4/398 (1%)

Query: 23  SGKLVRVVGLTLEATGCKAPVGSLCKVETMNGEM--EAEVVGFSGDNLFLMPSEQIIGVL 80
           +GK+  VVG  ++  G    +G LC++ T  G++    EV+GF+ ++  + P  Q+  V 
Sbjct: 43  TGKIAEVVGTLIKVAGIDLKLGELCELRTPQGKLLQHGEVIGFTREHAVVSPFAQLSEVS 102

Query: 81  PGAKVTPITTESGLPVGMELLGRVIDGVGNPLDGLGPIYTDQRASLNAIPINPLARKPIN 140
               V  +     +PVG  LLGRVID +G P+DG GPI +D+   + A P NP+ R+ I 
Sbjct: 103 RATHVIGLQRPLSVPVGDGLLGRVIDALGQPMDGRGPIESDESRPIFADPPNPMTRRMIE 162

Query: 141 EPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREV 200
            P+  G++ I+ + T+ +GQR+G+FA +GVGKS  LGM+ RG    + V+ LIGERGREV
Sbjct: 163 HPMVTGVRVIDAMTTLAEGQRMGIFAPAGVGKSTLLGMLARGAQCDINVIALIGERGREV 222

Query: 201 KEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTR 260
           +EF+E ILG  G  RSVVV A +D S   R K    A  IAEYFRD+G  VLL+MDSLTR
Sbjct: 223 REFVELILGEKGMARSVVVCATSDRSSSERAKAAYVATAIAEYFRDEGKRVLLMMDSLTR 282

Query: 261 FAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQ 320
           FA+A REI L+ GEPPA +G+PPSVFA+LP L+ERAG G   +GSITA +TVL E +   
Sbjct: 283 FARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--ERGSITALYTVLAEDESGS 340

Query: 321 DPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVMPQITTDEHLLMSKAVRQILS 380
           DPIA+  R +LDGH++LSRE+A    YPAIDV  S+SRVM Q+   E +  S  +R++L+
Sbjct: 341 DPIAEEVRGVLDGHLILSREIAAQNRYPAIDVLGSLSRVMSQVMPREFMASSGRLRKLLA 400

Query: 381 VCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQQ 418
             R+   L+ IG Y+PGT+   D A      L  +L Q
Sbjct: 401 KHREVDMLLQIGEYQPGTNALADEAIAKIDALKAFLSQ 438