Pairwise Alignments

Query, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., Type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  318 bits (815), Expect = 2e-91
 Identities = 177/396 (44%), Positives = 249/396 (62%), Gaps = 5/396 (1%)

Query: 43  VGSLCKVETMNGEMEAEVVGFSGDNLFLMPSEQIIGVLPGAKVTPITTESGLPVGMELLG 102
           +G LC ++   GE  AEVVG +G    L P    IG+  G +V  +     +PVG  LLG
Sbjct: 42  MGELCCIKP--GEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLG 99

Query: 103 RVIDGVGNPLDGLGPIYTDQRASLNAIPINPLARKPINEPLDVGIKAINGLLTVGKGQRI 162
           RVIDG G PLDG   +        +A+P   + R+PI +PL  GI+AI+ + T G+GQR+
Sbjct: 100 RVIDGFGRPLDGR-ELPDVCWKDYDAMPPPAMVRQPITQPLMTGIRAIDSVATCGEGQRV 158

Query: 163 GLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAP 222
           G+F+  GVGKS  L M+     A   V+ LIGERGREV+EFI+  L  + R+R V+V A 
Sbjct: 159 GIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVAT 218

Query: 223 ADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYP 282
           +D   L R++    A TIAE+FRD G  V+LL DSLTR+A+A REIAL+ GE   +  YP
Sbjct: 219 SDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYP 278

Query: 283 PSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMA 342
           P VF+ LP L+ER G G   +GSITAF+TVL EGDD+ +P+AD  R++LDGHIVLSR +A
Sbjct: 279 PGVFSALPRLLERTGMG--EKGSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLA 336

Query: 343 DAGHYPAIDVEKSVSRVMPQITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTDKAI 402
           + GHYPAIDV  ++SRV P +T+ EH  ++  +R+ L++ ++ + L+ IG Y+ G D   
Sbjct: 337 ERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDT 396

Query: 403 DAAFTLKPKLDQYLQQAMKETVPYDMCVNMLRHVLS 438
           D A    P +  +L+Q+  E    ++ +  L  +L+
Sbjct: 397 DKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQILT 432