Pairwise Alignments

Query, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., type III secretion system ATPase SctN from Erwinia amylovora T8

 Score =  280 bits (716), Expect = 6e-80
 Identities = 168/417 (40%), Positives = 241/417 (57%), Gaps = 13/417 (3%)

Query: 27  VRVVGLTLEATGCKAPVGSLCKVETMNGEME----AEVVGFSGDNLFLMPSEQIIGVLPG 82
           +R+ G  +EA      +G +C++E    E E    A+V+GF+ ++  L       G    
Sbjct: 13  LRIQGNVIEAHLPGTRIGEICEIEKSLLEPEVVGFAQVIGFNKEHTLLSLLNDNNGFSRD 72

Query: 83  AKVTPITTESGLPVGMELLGRVIDGVGN---PLDGLGPIYTD---QRASLNAIPINPLAR 136
             + P      + V    LG ++D  G     LDG GP+      +      +P +   R
Sbjct: 73  NVLLPTGKPFRVAVSERTLGAILDATGTIQGRLDG-GPVAAPTGVENLETGGVPRDFTQR 131

Query: 137 KPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGER 196
           KPI  PL  G++AI+GLLT G+GQR+G+FA +G GK+  + M+   + A + V+GLIGER
Sbjct: 132 KPIAVPLATGVRAIDGLLTCGQGQRMGIFAATGCGKTSLMSMIIEHSEADIYVIGLIGER 191

Query: 197 GREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMD 256
           GREV EF+EE+     R + V+V A +D S + R    Q A T+AEYF +QG +VLL +D
Sbjct: 192 GREVTEFVEELRRSSRRSKVVLVYATSDRSCVERCNAAQVASTVAEYFCEQGKNVLLFID 251

Query: 257 SLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEG 316
           S+TR+A+A R++ALS+GE PA +GYP SVF  LP L+ER G      GSI+AF+TVL E 
Sbjct: 252 SVTRYARALRDVALSMGELPARRGYPASVFEALPKLLERPGRF--LTGSISAFYTVLIEN 309

Query: 317 DDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVMPQITTDEHLLMSKAVR 376
           ++  D I D  R+ILDGHI LS+++A  GHYPAIDV +S+SRV  Q+T  EH  ++   R
Sbjct: 310 EEESDVIGDEVRSILDGHIYLSKKLAAKGHYPAIDVLQSISRVFQQVTQPEHQQLATHFR 369

Query: 377 QILSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQQAMKETVPYDMCVNML 433
             L      Q  + +G YK G ++  DAAF  K  ++ +L+Q M E      C+  L
Sbjct: 370 DYLVRQNDMQLFIDLGEYKRGENEDNDAAFDKKSAMEAFLKQRMAEQTDIKTCLESL 426