Pairwise Alignments

Query, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., type III secretion system ATPase SctN from Erwinia tracheiphila SCR3

 Score =  324 bits (830), Expect = 4e-93
 Identities = 171/420 (40%), Positives = 260/420 (61%), Gaps = 9/420 (2%)

Query: 24  GKLVRVVGLTLEATGCKAPVGSLCKV-ETMNGEMEAEVVGFSGDNLFLMPSEQIIGVLPG 82
           G++  + G+ +E +   A +G LC++  +  G + +E+VGFS + + L     + G+  G
Sbjct: 31  GRVTGISGILIECSLPDARIGDLCRILRSDGGSVLSEIVGFSPEKILLSALGALDGISQG 90

Query: 83  AKVTPITTESGLPVGMELLGRVIDGVGNPLDGLG-PIYTDQRASLNAIPI-----NPLAR 136
           A + P+     + V   LLG V+DG G PL+  G   + +    + A+P+      P  R
Sbjct: 91  ATIIPLYLPHSICVSDRLLGSVLDGFGRPLEPGGHSAFAEPGTDVRAVPVLSDAPPPTER 150

Query: 137 KPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGER 196
             IN PL  G++AI+GLLT+G GQR+G+FAG+G GK+  L  + R T   V+V GLIGER
Sbjct: 151 PRINSPLPTGLRAIDGLLTIGNGQRVGIFAGAGCGKTTLLAELARNTPCDVIVFGLIGER 210

Query: 197 GREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMD 256
           GRE++EF++  L  + R R+V++ A +D S + R +   TA  IAE FR +G  VLL++D
Sbjct: 211 GRELREFLDHELDDELRSRTVLLCATSDRSSMERARAAFTATAIAEAFRTEGKSVLLIVD 270

Query: 257 SLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEG 316
           SLTRFA+AQREI L++GEPP   G PPSV+  LP LVERAG     QG+ITA ++VL E 
Sbjct: 271 SLTRFARAQREIGLALGEPPGRGGLPPSVYTLLPRLVERAGQ--TTQGAITALYSVLIEQ 328

Query: 317 DDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVMPQITTDEHLLMSKAVR 376
           D + DP+AD  R+++DGHIVLSR +A+  HYPAID+  S+SR M  +   EH+  +  +R
Sbjct: 329 DSMNDPVADEVRSLIDGHIVLSRRLAEQNHYPAIDILASLSRTMSNVVPREHMRQAGQIR 388

Query: 377 QILSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQQAMKETVPYDMCVNMLRHV 436
            +++  ++ + L+ +G Y+PG D   DAA      ++++L+Q+M+E       ++ L  V
Sbjct: 389 SLMAAYKQVEMLIRLGEYQPGNDILTDAAVNANDVINRFLRQSMREPDDLGQILSQLAEV 448