Pairwise Alignments

Query, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., type III secretion system ATPase SctN from Escherichia coli ECRC100

 Score =  279 bits (714), Expect = 1e-79
 Identities = 164/414 (39%), Positives = 236/414 (57%), Gaps = 9/414 (2%)

Query: 31  GLTLEATGCKAPVGSLCKVETMNGEME----AEVVGFSGDNLFLMPSEQIIGVLPGAKVT 86
           G  +EA      VG +C++       E    A+VVGF      L      +G+   A + 
Sbjct: 18  GSLIEAELDDVSVGEVCEIYASRQANERIARAQVVGFRNGKTLLNLIGSSVGLTRTAVLK 77

Query: 87  PITTESGLPVGMELLGRVIDGVGNPLDGLGPIYTDQRASLNAI---PINPLARKPINEPL 143
           P   +  + +    LG V++  G  ++   P     R +L  I   P +   R+ IN PL
Sbjct: 78  PTGEQLTIQISDAFLGSVLNASGQIMERFVPDTPGDRGNLRLIDELPPSYQERRVINTPL 137

Query: 144 DVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEF 203
           +  I+ I+G+LT G GQR+G+FA +G GK+V + M+   T A V V+GLIGERGREV E 
Sbjct: 138 ETRIRVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTEC 197

Query: 204 IEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQ 263
            E +       + V+V A +D S + R      A T+AEYFRD+G  V+L +DS+TR+A+
Sbjct: 198 AESLKKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYAR 257

Query: 264 AQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPI 323
           A R++ L+ GEPPA +GYP SVF  LP L+ER   G   +GSIT F+TVL EG+D  DP+
Sbjct: 258 ALRDMKLAAGEPPARRGYPASVFDSLPRLLERP--GPTLKGSITEFYTVLLEGEDESDPL 315

Query: 324 ADASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVMPQITTDEHLLMSKAVRQILSVCR 383
            D  R+ILDGHI LSR++A  GHYPAIDV KSVSRV  Q+T ++H   +  VR+ L+   
Sbjct: 316 GDEIRSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKNLTTLE 375

Query: 384 KNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQQAMKETVPYDMCVNMLRHVL 437
             Q  + +G Y+ G +   D A   +PKL  +L+Q++ E +P    +  L  ++
Sbjct: 376 DLQVFIDLGEYRAGQNAENDFAMNARPKLTNWLKQSVNEKMPMSETLKELERIV 429