Pairwise Alignments

Query, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., flagellum-specific ATP synthase from Agrobacterium fabrum C58

 Score =  273 bits (699), Expect = 6e-78
 Identities = 169/440 (38%), Positives = 248/440 (56%), Gaps = 24/440 (5%)

Query: 3   ALADRLAQY-KVEGHTTRP---MASGKLVRVVGL---TLEATGCKAPVGSLCKVETMNGE 55
           A++ +LAQ   + GH   P   +A G  VR +     T+        +G      +  G 
Sbjct: 17  AISPKLAQLASLAGHYADPEFSVAHGGHVRTIAAGHYTVSGLSRHVRLGEFVAHRSATGI 76

Query: 56  MEAEVVGFSGDNLFLMPSEQIIGVLPGAKV---TPITTESGLPVGME--LLGRVIDGVGN 110
              EVV    D  ++ P E      PG  +     +  +    V  +    GR I+ +G 
Sbjct: 77  HLGEVVRVEPDICYVCPIE------PGEPIGIHDTVIRKGAFRVSPDESWCGRTINALGE 130

Query: 111 PLDGLGPIYTD---QRASLNAIPINPLARKPINEPLDVGIKAINGLLTVGKGQRIGLFAG 167
           P+DG GP+ +    +  S NA P   + RK +  P   G++AI+    +  GQR+G+FAG
Sbjct: 131 PIDGQGPLASGIVRRSISNNAPP--SMTRKRVETPFKTGVRAIDIFSPLCLGQRLGIFAG 188

Query: 168 SGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSP 227
           SGVGKS  L M+ +      VV+ L+GERGREV+EFIE+ +G D   +SV V A +D SP
Sbjct: 189 SGVGKSTLLSMLAKADAFDKVVIALVGERGREVREFIEDTMG-DNMSKSVAVVATSDESP 247

Query: 228 LMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFA 287
           ++R     +A+TIAE+FRDQG +VLL++DS+TRFA A RE+A++ GEPP  +GYP SVF 
Sbjct: 248 MLRKMAPLSAVTIAEHFRDQGDNVLLIIDSVTRFAHAIREVAVASGEPPVARGYPASVFT 307

Query: 288 KLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHY 347
           +LP L+ERAG G    G+ITA  ++L +GD+  DPIAD++R ILDGHIVL R +A+ G Y
Sbjct: 308 ELPRLLERAGPGAEGTGTITAIVSILVDGDNHNDPIADSTRGILDGHIVLDRSLAEEGRY 367

Query: 348 PAIDVEKSVSRVMPQITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTDKAIDAAFT 407
           P I+   S+SR+  +  T +   +   ++ ++    + +DL  IG Y+PGTD  +D A  
Sbjct: 368 PPINPLASISRLAKKAWTPDQEKLVSRLKALVHRFEETRDLRLIGGYRPGTDPDLDMAVK 427

Query: 408 LKPKLDQYLQQAMKETVPYD 427
             P + + L+Q   E    D
Sbjct: 428 QVPIIYETLKQLPDEPAAQD 447