Pairwise Alignments

Query, 674 a.a., flagellar hook-length control protein FliK from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., flagellar hook-length control protein from Pseudomonas simiae WCS417

 Score = 98.2 bits (243), Expect = 7e-25
 Identities = 115/414 (27%), Positives = 167/414 (40%), Gaps = 37/414 (8%)

Query: 285 ASLAAANTVHAEPVEGAMLEGMPLTQTFANTAALASPSAEVSEALAASSQALKATP---L 341
           AS  +  T  A+        G P   +    A    P+A  + A+A S + L ATP    
Sbjct: 43  ASQGSKPTAKADDNAPKSTAGKPSDASAKPAAGNDKPAAS-TPAVADSGKPLPATPPANT 101

Query: 342 TQSALNPASIMADEGLNQSTS----------ATETGKVVIPWGTQMPTDNELAALTPELK 391
             SA       AD  L Q             AT T  V +P  T  P  N+     P + 
Sbjct: 102 DDSASKDDDAPADPSLVQQPPVDPVVDPALIATVT-PVAVPVETPAPVTNKDEKALPVVA 160

Query: 392 AMLEEGGKAKAPVPNALAQSVAQGLTPAHLAAQQTGTTALPMNPTAATPIDIAALAPQTV 451
           A +    +AK   P    ++      PA   A + G      +   A       L   T 
Sbjct: 161 APVAATEEAK---PAFDPEADPLDAMPAVRLAMEQGGHVSASSQAQAKNAPAPTLDQPTA 217

Query: 452 AVNPMLNPAATVNPELAASSAMLAALGGRALAG------SDERRAVSESGQEDLAQQIAA 505
           A N     A  V+ +    S      G +A +G       D + A S++  +D A ++AA
Sbjct: 218 AQNFAAGLATMVDQQATKDSTDQG--GDKAFSGLIDDGLKDLKNASSDTRVDDFANRLAA 275

Query: 506 AAGQGTAQNQALNRAESQLVQTNATPVPLNKEMAADQLAERVQMMMSKNLKNIDIRLDPP 565
                T +      A +    TNA P+ +++    D++  RV  + S NLK+ +I+L P 
Sbjct: 276 LTQAATPKT-----ANALPPVTNA-PLAMHQSGWTDEIVNRVMYLSSANLKSAEIQLQPA 329

Query: 566 ELGRMHIRMNMQGDG-ATVHFTVANQHAREALEQTMPRLREMLAQQGVQLGDTSVQQQSA 624
           ELGR+ I++NM  D  A V+F  A+   REALE    RLREM AQQG+   D +V  QS 
Sbjct: 330 ELGRLDIKVNMTADQQAQVNFMSAHPVVREALESQSGRLREMFAQQGMGQVDVNVSDQSR 389

Query: 625 GQQQRYTGQEQSGFGQSARNERLNSEENLDTDIKLDLNVATK----RDGISYYA 674
           GQ+Q+    +  G   S      NS+     D+   +   T        + YYA
Sbjct: 390 GQEQQQQQAQTRGVSGSGGRGGDNSDSGSHIDVAEAVAPVTSTVIGSSAVDYYA 443