Pairwise Alignments

Query, 674 a.a., flagellar hook-length control protein FliK from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., Flagellar hook-length control protein FliK from Pseudomonas putida KT2440

 Score =  109 bits (273), Expect = 2e-28
 Identities = 99/309 (32%), Positives = 145/309 (46%), Gaps = 30/309 (9%)

Query: 378 PTDNELAALTPELKAMLEEGGKAKAPVPNA--LAQSVAQGLTPAHLAAQQTGTTALPMNP 435
           P      A T    A+ EE    +A  P+A  LA      L   H A  + GT+A  ++ 
Sbjct: 131 PVLQAATAQTQVSAALPEEPSAEEAFDPDADPLANLPTLRLALEHSAQAKGGTSAHALDA 190

Query: 436 TAATPIDIAALAPQTVAVNPMLNPAATVNPELAASSAMLAALGGRALAG------SDERR 489
             A   +  A      AVN + N     + E A S       GG+A          D + 
Sbjct: 191 AQAQGEEGQA------AVNTLANLVEDTDGESAES-------GGKAFGALLEDGLKDTKS 237

Query: 490 AVSESGQEDLAQQIAAAAGQGTAQN-QALNRAESQLVQTNATPVPLNKEMAADQLAERVQ 548
           A S++  +D A ++A+     TA+   A+    + L Q    P+P+N+   A+ L  RV 
Sbjct: 238 ASSDTRIDDFANRLASLTQAATAKTANAVPATANPLHQ----PLPMNQNAWAEGLVNRVM 293

Query: 549 MMMSKNLKNIDIRLDPPELGRMHIRMNMQGDGAT-VHFTVANQHAREALEQTMPRLREML 607
            + S+NLK+ DI+L+P ELGR+ IR+N+  D AT V F   +   R+AL+  + RLRE+ 
Sbjct: 294 YLSSQNLKSADIQLEPAELGRLDIRVNVAADQATQVTFISGHAGVRDALDSQVHRLRELF 353

Query: 608 AQQGVQLGDTSVQQQSAGQQQRYTGQEQSG--FGQSARNERLNSEENLDTDIKLDLNVAT 665
           AQQG+   D +V  QS GQQQ+  GQ Q     G +AR       E +D+   L+  V  
Sbjct: 354 AQQGLAQPDVNVADQSRGQQQQ-QGQAQGSNLSGVAARRAEQGGAEAVDSARPLEQQVVV 412

Query: 666 KRDGISYYA 674
               + YYA
Sbjct: 413 GDSAVDYYA 421