Pairwise Alignments

Query, 349 a.a., flagellar motor switch protein FliM from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., flagellar motor switch protein FliM from Rhodanobacter sp000427505 FW510-R12

 Score =  367 bits (942), Expect = e-106
 Identities = 179/316 (56%), Positives = 245/316 (77%), Gaps = 3/316 (0%)

Query: 1   MTDLLSQDEIDALLHGVD--SVDEEEEELPKSGPSATNFDFSSQDRIVRGRMPTLELINE 58
           M+DLLSQDEIDALL GV   +V    +E P S    T +DF+ QDRIVRGR+PTLE++NE
Sbjct: 1   MSDLLSQDEIDALLDGVSGGAVATGGDEPPPSDAVVT-YDFTQQDRIVRGRLPTLEMVNE 59

Query: 59  RFARHLRISLFNMLRKTAEVSINGVQMMKFGEYQNTLYVPTSLNMVRFRPLKGTALVTME 118
           RFAR  R+ +FN+LRKT EVS+ GV+M+KF EY ++L VP++LN+VR +PL+GTALV  E
Sbjct: 60  RFARFFRLGVFNVLRKTCEVSVLGVKMVKFAEYVHSLAVPSNLNLVRIKPLRGTALVVFE 119

Query: 119 ARLVFILVENFFGGDGRYHARIEGREFTPTERRVIQLLLKIVFADYKEAWSPVMGVEFEY 178
            RLVF +++NFFGGDGR+HARIEGR+FT TE RVIQ++L+ +F    EAW+PV+ ++FEY
Sbjct: 120 PRLVFTVIDNFFGGDGRFHARIEGRDFTATENRVIQIMLEELFGAMVEAWAPVLELQFEY 179

Query: 179 LDSEVNPSMANIVSPTEVIVVSSFHVEVDGGGGDFHMVMPYSMVEPIRELLDAGVQSDKM 238
            +SE+NP  ANIVSPTE +VVS FHVE+DGGGG+ H+ +PY+MVEPIR LLDAGVQSD+ 
Sbjct: 180 QNSEINPQFANIVSPTETVVVSRFHVELDGGGGEIHLTLPYAMVEPIRTLLDAGVQSDRA 239

Query: 239 ETDVRWSTALREEIMDVPVNFRVNLLEMDIALRDLMELQVGDVIPIKMPEHAVMFVEELP 298
           + D RW+  L+EE+ D  V+    LL++ ++L + + L+ GDVIP+++PE A ++ E++P
Sbjct: 240 DRDDRWAEMLQEEVFDAEVDLSSLLLDVRLSLGEFLHLRPGDVIPVQLPELATVYAEDVP 299

Query: 299 TYRVKMGRSGEKLAVQ 314
            +R   G+SG + AV+
Sbjct: 300 VFRGHYGQSGGRNAVR 315