Pairwise Alignments

Query, 349 a.a., flagellar motor switch protein FliM from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., flagellar motor switch protein FliM from Magnetospirillum magneticum AMB-1

 Score =  151 bits (382), Expect = 2e-41
 Identities = 93/319 (29%), Positives = 164/319 (51%), Gaps = 10/319 (3%)

Query: 2   TDLLSQDEIDALLHGVDSVDEEEEELPKSGPSATNFDFSSQDRIVRGRMPTLELINERFA 61
           T +L+QDEID+LL   D +    +   KSG  A      +   +   R+P LE++ +R  
Sbjct: 76  TRVLNQDEIDSLLGFDDDMGGAND---KSGIQA----ILNSALVSYERLPMLEVVFDRLV 128

Query: 62  RHLRISLFNMLRKTAEVSINGVQMMKFGEYQNTLYVPTSLNMVRFRPLKGTALVTMEARL 121
           R +  S+ N      EVS++ +  ++FG+Y N++ +P  L + +        L+T+++ L
Sbjct: 129 RMMSTSMRNFTSDNVEVSLDNILSLRFGDYLNSIPLPAMLAVFKAEEWDNFGLLTVDSSL 188

Query: 122 VFILVENFFGGD-GRYHARIEGREFTPTERRVIQLLLKIVFADYKEAWSPVMGVEFEYLD 180
           ++ +V+   GG  G    RIEGR +T  ER +++ ++ +V +D   A+ P+  V F +  
Sbjct: 189 IYSIVDVLLGGRRGTAAMRIEGRPYTTIERNLVERMVHVVLSDLSAAFDPLSPVTFRFDR 248

Query: 181 SEVNPSMANIVSPTEVIVVSSFHVEVDGGGGDFHMVMPYSMVEPIRELLDAGVQSDKMET 240
            E NP  A I  P+   +V+   ++++  GG   +++PY+ +EP+RELL      +K   
Sbjct: 249 LETNPRFATISRPSNAAIVAKLRIDMEDRGGRLELLLPYATLEPVRELLLQMFMGEKFGR 308

Query: 241 DVRWSTALREEIMDVPVNFRVNLLEMDIALRDLMELQVGD--VIPIKMPEHAVMFVEELP 298
           D  W T L EE+    V     L E  + LR+++  + G   ++         M   E+ 
Sbjct: 309 DSIWETHLAEELWLTEVELEAVLDEQVMNLREVLNWKPGSKFMLNATADSQIDMRCGEVA 368

Query: 299 TYRVKMGRSGEKLAVQVSE 317
            +R +MGR G+ +A+QV E
Sbjct: 369 MFRGRMGRKGQHIAIQVDE 387