Pairwise Alignments

Query, 349 a.a., flagellar motor switch protein FliM from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., flagellar motor switch protein FliM from Enterobacter asburiae PDN3

 Score =  235 bits (599), Expect = 1e-66
 Identities = 119/321 (37%), Positives = 193/321 (60%), Gaps = 9/321 (2%)

Query: 4   LLSQDEIDALLHGVDSVDEEEEELPKSGPSATN----FDFSSQDRIVRGRMPTLELINER 59
           +LSQ EIDALL+G    D +  + PK G    +    +D ++Q R+VR R+  LE+INER
Sbjct: 5   ILSQAEIDALLNG----DSDNNDDPKPGIGGDSDIRPYDPNTQRRVVRERLQALEIINER 60

Query: 60  FARHLRISLFNMLRKTAEVSINGVQMMKFGEYQNTLYVPTSLNMVRFRPLKGTALVTMEA 119
           FAR  R+ LFN+LR++ ++++  +++  + E+   L VPT+LN++  +PL+GT LV    
Sbjct: 61  FARQFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNLNLIHLKPLRGTGLVVFSP 120

Query: 120 RLVFILVENFFGGDGRYHARIEGREFTPTERRVIQLLLKIVFADYKEAWSPVMGVEFEYL 179
            LVFI V+N FGGDGR+  ++EGREFT TE+RVI  +LK+    Y +AW  +  +E EY+
Sbjct: 121 SLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVINRMLKLALESYSDAWKAINPLEVEYV 180

Query: 180 DSEVNPSMANI-VSPTEVIVVSSFHVEVDGGGGDFHMVMPYSMVEPIRELLDAGVQSDKM 238
            SE+     NI  SP +++V + FHVE+    G+F++ +P+SM+EP+RELL      +  
Sbjct: 181 RSEMQVKFTNITTSPNDIVVNTPFHVEIGNLTGEFNICLPFSMIEPLRELLVNPPLENSR 240

Query: 239 ETDVRWSTALREEIMDVPVNFRVNLLEMDIALRDLMELQVGDVIPIKMPEHAVMFVEELP 298
             D  W   L  ++    +    +  ++ + L  +++LQ GDV+PI+ P+  +  V+ +P
Sbjct: 241 NEDQNWRENLVRQVQHSQLELVASFADIPLRLSQILKLQPGDVLPIEKPDRIIAHVDGVP 300

Query: 299 TYRVKMGRSGEKLAVQVSEKI 319
               + G    + A++V   I
Sbjct: 301 VLTSQYGTINGQYALRVEHLI 321