Pairwise Alignments

Query, 349 a.a., flagellar motor switch protein FliM from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., flagellar motor switch protein FliM from Dickeya dianthicola ME23

 Score =  234 bits (596), Expect = 3e-66
 Identities = 116/320 (36%), Positives = 193/320 (60%), Gaps = 5/320 (1%)

Query: 4   LLSQDEIDALLHGVD---SVDEEEEELPKSGPSATNFDFSSQDRIVRGRMPTLELINERF 60
           +LSQ EIDALL+G     S D       K G     +D ++Q R++R R+  LE+INERF
Sbjct: 5   ILSQAEIDALLNGDSGDSSADASNAASQKDG-DVKPYDPNTQRRVIRERLQALEIINERF 63

Query: 61  ARHLRISLFNMLRKTAEVSINGVQMMKFGEYQNTLYVPTSLNMVRFRPLKGTALVTMEAR 120
           AR  R+ LFN+LR++ ++++  +++  + E+   L VPT+LN++  +PL+GTAL      
Sbjct: 64  ARQFRMGLFNLLRRSPDITVGAIKIQPYHEFARNLPVPTNLNLIHLKPLRGTALFVFSPS 123

Query: 121 LVFILVENFFGGDGRYHARIEGREFTPTERRVIQLLLKIVFADYKEAWSPVMGVEFEYLD 180
           LVFI V+N FGGDGR+  ++EGREFT TE+RV++ +LK+    Y +AW+ +  ++ EY+ 
Sbjct: 124 LVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVVRRMLKLALESYSDAWNAIYKLDVEYVR 183

Query: 181 SEVNPSMANI-VSPTEVIVVSSFHVEVDGGGGDFHMVMPYSMVEPIRELLDAGVQSDKME 239
           SE+     NI  SP +++V + FH+E+    G+F + +P+SM+EP+RELL      +  +
Sbjct: 184 SEMQVKFTNITTSPNDIVVTTPFHLEIGTLTGEFSICIPFSMIEPLRELLANPPLENSQQ 243

Query: 240 TDVRWSTALREEIMDVPVNFRVNLLEMDIALRDLMELQVGDVIPIKMPEHAVMFVEELPT 299
            D  W   L +++    +    N +++ + L  +++L+ GD++PI  PE  V  V+ +P 
Sbjct: 244 EDQHWRETLAKQVQHSELELVANFVDIPVRLSKVLKLKPGDILPIDKPERLVAHVDGVPV 303

Query: 300 YRVKMGRSGEKLAVQVSEKI 319
              + G    + A++V   I
Sbjct: 304 LTCQYGTLDGQYALRVEHLI 323