Pairwise Alignments

Query, 349 a.a., flagellar motor switch protein FliM from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., Flagellar motor switch protein FliM from Alteromonas macleodii MIT1002

 Score =  505 bits (1301), Expect = e-148
 Identities = 245/351 (69%), Positives = 300/351 (85%), Gaps = 5/351 (1%)

Query: 1   MTDLLSQDEIDALLHGVDSVDEEEEELPKSGPSATNFDFSSQDRIVRGRMPTLELINERF 60
           M+DLLSQDEIDALLHGVD V+EEE     S  S   +DFSSQDRIVRGRMPTLE++NERF
Sbjct: 1   MSDLLSQDEIDALLHGVDDVEEEEVGGSDSDASTLEYDFSSQDRIVRGRMPTLEIVNERF 60

Query: 61  ARHLRISLFNMLRKTAEVSINGVQMMKFGEYQNTLYVPTSLNMVRFRPLKGTALVTMEAR 120
           ARH+R+SLFNM+R++AEVSING+QM+KFGEY +TL+VPTSLNMVRFRPLKGT L+TMEAR
Sbjct: 61  ARHMRVSLFNMMRRSAEVSINGIQMIKFGEYIHTLFVPTSLNMVRFRPLKGTGLITMEAR 120

Query: 121 LVFILVENFFGGDGRYHARIEGREFTPTERRVIQLLLKIVFADYKEAWSPVMGVEFEYLD 180
           LVFILV+NFFGGDGRYHA+IEGREFTPTERR+IQ+LLKI+F DYKEAW+PVM V FEYLD
Sbjct: 121 LVFILVDNFFGGDGRYHAKIEGREFTPTERRIIQMLLKIIFEDYKEAWAPVMDVSFEYLD 180

Query: 181 SEVNPSMANIVSPTEVIVVSSFHVEVDGGGGDFHMVMPYSMVEPIRELLDAGVQSDKMET 240
           SEVNP+MANIVSPTEV+V+SSFH+E+DGGGGDFH+ +PYSM+EPIRELLDAGVQSDK +T
Sbjct: 181 SEVNPAMANIVSPTEVVVISSFHIELDGGGGDFHVSLPYSMLEPIRELLDAGVQSDKEDT 240

Query: 241 DVRWSTALREEIMDVPVNFRVNLLEMDIALRDLMELQVGDVIPIKMPEHAVMFVEELPTY 300
           D+RWS ALR+EIMDV V    ++L++D+ LRD+ME + GD+IP++MPE   + +E+LPT+
Sbjct: 241 DLRWSKALRDEIMDVKVALTTHMLDVDVPLRDVMEFKPGDIIPVEMPETITVLIEDLPTF 300

Query: 301 RVKMGRSGEKLAVQVSEKIKRPDVVKTDLAFLGK-----DIIAEFENAEED 346
           R K+GRS + LA+++ EKI RP  VK++L  L +     D  AE +  EED
Sbjct: 301 RAKLGRSRDNLALKIVEKIARPTSVKSELQLLTRGGRIIDNDAELQVLEED 351