Pairwise Alignments

Query, 136 a.a., flagellar motor switch protein FliN from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., Type III secretion inner membrane protein (YscQ,homologous to flagellar export components) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 45.8 bits (107), Expect = 6e-10
 Identities = 24/92 (26%), Positives = 44/92 (47%)

Query: 32  LAAPLEELKNTAPPITDDERRKLDTIMDIPVTISMEVGRSKISIRNLLQLNQGSVVELDR 91
           L   +E L  +  P++  +      +  IP  +  EVGR+ + I  L QL  G V+ +  
Sbjct: 222 LVQDIETLLASGSPMSKSDGTSSVELEQIPQQVLFEVGRASLEIGQLRQLKTGDVLPVGG 281

Query: 92  IAGESLDVMVNGTLIAHGEVVVVNDKFGIRLT 123
                + + VN  +I  GE++   ++F +R+T
Sbjct: 282 CFAPEVTIRVNDRIIGQGELIACGNEFMVRIT 313