Pairwise Alignments

Query, 136 a.a., flagellar motor switch protein FliN from Vibrio cholerae E7946 ATCC 55056

Subject, 137 a.a., flagellar motor switch protein FliN from Escherichia coli ECRC99

 Score =  106 bits (264), Expect = 1e-28
 Identities = 58/133 (43%), Positives = 88/133 (66%), Gaps = 17/133 (12%)

Query: 20  DPNAPDID----VDEILAAPLEELKNTAPPITDDE-------------RRKLDTIMDIPV 62
           D N P  D    +D++ A  L E K+T+     D               + +D IMDIPV
Sbjct: 3   DMNNPADDNNGAMDDLWAEALSEQKSTSSKSAADAVFQQFGGGDVSGTLQDIDLIMDIPV 62

Query: 63  TISMEVGRSKISIRNLLQLNQGSVVELDRIAGESLDVMVNGTLIAHGEVVVVNDKFGIRL 122
            +++E+GR++++I+ LL+L QGSVV LD +AGE LD+++NG LIA GEVVVV DK+G+R+
Sbjct: 63  KLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRI 122

Query: 123 TDVISQTERIKKL 135
           TD+I+ +ER+++L
Sbjct: 123 TDIITPSERMRRL 135