Pairwise Alignments

Query, 299 a.a., flagellar biosynthetic protein FliP from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., flagellar biosynthesis protein flip from Pseudomonas simiae WCS417

 Score =  308 bits (790), Expect = 6e-89
 Identities = 150/221 (67%), Positives = 190/221 (85%), Gaps = 1/221 (0%)

Query: 78  IPAFTMTTNSDGSEDYSINLQILALMTMLGFLPAMVILMTSFTRIVVVMSILRQAMGLQQ 137
           IPA T+ TN+ G+++YS++LQIL +MT L F+PA V+LMTSFTRI++V SILRQA+GLQQ
Sbjct: 24  IPAITLGTNATGAQEYSVSLQILLIMTALSFIPAFVMLMTSFTRIIIVFSILRQALGLQQ 83

Query: 138 TPSNQVIIGIALFLTFFIMAPVFNQINEQAVQPYLNEQITARQAFDLAQEPLKAFMLKQT 197
           TPSNQ++ G+ALFLT FIMAPVF+++N+QA+QPYL E++TA+ A D AQ P+K FML QT
Sbjct: 84  TPSNQILTGMALFLTLFIMAPVFDKVNQQALQPYLAEKMTAQDAIDKAQGPIKDFMLSQT 143

Query: 198 RVNDLETFVEMS-GAQVTAPEQVSMAVLIPAFITSELKTAFQIGFMLFLPFLIIDLVVAS 256
           R +DLE F+ +S    +  P+Q  + +L+PAF+TSELKTAFQIGFM+F+PFLIIDLVVAS
Sbjct: 144 RSSDLELFMRLSKRTDIATPDQAPLTILVPAFVTSELKTAFQIGFMIFIPFLIIDLVVAS 203

Query: 257 VLMAMGMMMLSPMIVSLPFKLMLFVLVDGWNLILSTLAGSF 297
           VLMAMGMMMLSP+I+SLPFK+MLFVLVDGW LI+ TLAGSF
Sbjct: 204 VLMAMGMMMLSPLIISLPFKIMLFVLVDGWALIIGTLAGSF 244