Pairwise Alignments

Query, 299 a.a., flagellar biosynthetic protein FliP from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., type III secretion system export apparatus subunit SctR from Paraburkholderia sabiae LMG 24235

 Score =  157 bits (398), Expect = 2e-43
 Identities = 81/211 (38%), Positives = 134/211 (63%), Gaps = 10/211 (4%)

Query: 97  LQILALMTMLGFLPAMVILMTSFTRIVVVMSILRQAMGLQQTPSNQVIIGIALFLTFFIM 156
           + ++A++  LG  P   +++TS+T++VVV+ +LR A+G+QQ P N V+ GIAL L+ FIM
Sbjct: 8   VSLIAVIVALGIAPFAALMVTSYTKLVVVLGLLRSALGIQQVPPNMVLNGIALILSLFIM 67

Query: 157 APVFNQINEQAVQPYLNEQITARQA-----FDLAQEPLKAFMLKQTRVNDLETFVEMSGA 211
           APV   I +   +   N       A      D A  P+K F+   TR+ D + FV+ + +
Sbjct: 68  APVGMNIRDALQERNFNPSGQLSTADIGALADAALPPIKDFLTAHTRLRDRQFFVKTATS 127

Query: 212 -----QVTAPEQVSMAVLIPAFITSELKTAFQIGFMLFLPFLIIDLVVASVLMAMGMMML 266
                +    +   + VL+P+F  +EL  AFQIGF++++ F+++DL+VA++L+A+GM M+
Sbjct: 128 VWPKSRAEGLKDDDLLVLVPSFTLAELTKAFQIGFVIYIVFIVVDLLVANILLALGMQMI 187

Query: 267 SPMIVSLPFKLMLFVLVDGWNLILSTLAGSF 297
           SP  +S+PFKL+LFV +DGW+L++  L  S+
Sbjct: 188 SPTTISVPFKLLLFVALDGWSLLVHGLVLSY 218