Pairwise Alignments

Query, 299 a.a., flagellar biosynthetic protein FliP from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., flagellar type III secretion system pore protein FliP from Escherichia coli ECRC101

 Score =  237 bits (605), Expect = 2e-67
 Identities = 115/221 (52%), Positives = 162/221 (73%), Gaps = 1/221 (0%)

Query: 78  IPAFTMTTNSDGSEDYSINLQILALMTMLGFLPAMVILMTSFTRIVVVMSILRQAMGLQQ 137
           +P  T      G + +S+ +Q L  +T L F+PA++++MTSFTRI++V  +LR A+G   
Sbjct: 23  LPGITSQPLPGGGQSWSLPVQTLVFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPS 82

Query: 138 TPSNQVIIGIALFLTFFIMAPVFNQINEQAVQPYLNEQITARQAFDLAQEPLKAFMLKQT 197
            P NQV++G+ALFLTFFIM+PV ++I   A QP+  E+I+ ++A +   +PL+ FML+QT
Sbjct: 83  APPNQVLLGLALFLTFFIMSPVIDKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQT 142

Query: 198 RVNDLETFVEMSGA-QVTAPEQVSMAVLIPAFITSELKTAFQIGFMLFLPFLIIDLVVAS 256
           R  DL  F  ++    +  PE V M +L+PA++TSELKTAFQIGF +F+PFLIIDLV+AS
Sbjct: 143 READLGLFARLANTGPLQGPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIAS 202

Query: 257 VLMAMGMMMLSPMIVSLPFKLMLFVLVDGWNLILSTLAGSF 297
           VLMA+GMMM+ P  ++LPFKLMLFVLVDGW L++ +LA SF
Sbjct: 203 VLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLAQSF 243