Pairwise Alignments

Query, 299 a.a., flagellar biosynthetic protein FliP from Vibrio cholerae E7946 ATCC 55056

Subject, 217 a.a., type III secretion system export apparatus protein SctR from Dickeya dianthicola ME23

 Score =  139 bits (349), Expect = 7e-38
 Identities = 74/202 (36%), Positives = 121/202 (59%), Gaps = 13/202 (6%)

Query: 106 LGFLPAMVILMTSFTRIVVVMSILRQAMGLQQTPSNQVIIGIALFLTFFIMAPVFNQINE 165
           L  +P M+I+ T F ++ +V+ I R A+G+QQ P N  + GIAL  T F+MAPVF+ I +
Sbjct: 18  LSLIPLMMIVCTCFLKVSMVLMITRNAIGVQQVPPNMALYGIALAATLFVMAPVFSDIKQ 77

Query: 166 --QAVQPYLNEQITARQAFDLAQEPLKAFMLKQT--------RVNDLETFVEMSGAQVTA 215
             Q      +       +     EPL+ FM + T          N L  +      ++T 
Sbjct: 78  RFQDAPVDFSSLDALESSVTKGIEPLQKFMSRNTDPDILTHLHENSLRMWPAAMSEKITT 137

Query: 216 PEQVSMAVLIPAFITSELKTAFQIGFMLFLPFLIIDLVVASVLMAMGMMMLSPMIVSLPF 275
               ++ +++PA++ SEL+  F+IGF++++PF++IDL+V++VL+A+GM M++P  +SLP 
Sbjct: 138 Q---NILLVLPAYVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPTTLSLPL 194

Query: 276 KLMLFVLVDGWNLILSTLAGSF 297
           KL+LFVLV+GW  +L  L  S+
Sbjct: 195 KLLLFVLVNGWTRLLDGLFYSY 216