Pairwise Alignments

Query, 299 a.a., flagellar biosynthetic protein FliP from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., flagellar biosynthetic protein from Agrobacterium fabrum C58

 Score =  201 bits (511), Expect = 1e-56
 Identities = 103/237 (43%), Positives = 150/237 (63%), Gaps = 4/237 (1%)

Query: 64  AKTIALGSSSGGGGIPAFTMTTNSDGSEDYSINLQILALMTMLGFLPAMVILMTSFTRIV 123
           A  +AL   +     P+    T  DGS    I ++   L+T+L   P ++I++TSF R V
Sbjct: 9   AVLLALPGLANAQQFPSDLFNTQIDGSVAAWI-IRTFGLLTVLSVAPGILIMVTSFPRFV 67

Query: 124 VVMSILRQAMGLQQTPSNQVIIGIALFLTFFIMAPVFNQINEQAVQPYLNEQITARQAFD 183
           +  SILR  MGL  TPSN +++ +A+F+TF++M+P F++     VQP L  QI  +QA  
Sbjct: 68  IAFSILRSGMGLASTPSNMILLSMAMFMTFYVMSPTFDKAWTDGVQPLLQNQINEQQAVQ 127

Query: 184 LAQEPLKAFMLKQTRVNDLETFVEMS---GAQVTAPEQVSMAVLIPAFITSELKTAFQIG 240
              EP + FM   TR  DL+ FV+++   G  V     V   VL+PAF+ SE++  F+IG
Sbjct: 128 RIAEPFRTFMNANTRDKDLKLFVDIARERGQVVMTDNVVDYRVLVPAFMLSEIRRGFEIG 187

Query: 241 FMLFLPFLIIDLVVASVLMAMGMMMLSPMIVSLPFKLMLFVLVDGWNLILSTLAGSF 297
           F++ LPFL+IDL+VA++ MAMGMMML P  +SLPFK++ FVL+DGWNL++ +L  SF
Sbjct: 188 FLIILPFLVIDLIVATITMAMGMMMLPPTSISLPFKILFFVLIDGWNLLVGSLVRSF 244