Pairwise Alignments

Query, 260 a.a., flagellar type III secretion system protein FliR from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., flagellar biosynthetic protein FliR from Rhodanobacter sp000427505 FW510-R12

 Score =  138 bits (347), Expect = 1e-37
 Identities = 72/227 (31%), Positives = 126/227 (55%), Gaps = 3/227 (1%)

Query: 11  FIANYFWPYTRIAAMLMVMTVTGARFVPARVRLYLGLALTFAVMPAIPAVPSDIALLSLQ 70
           ++ + FW   R++ + +V  V  A  V AR+R+ + + L+  + P  PA    I  LS  
Sbjct: 12  WLGSLFWAVGRVSGLCLVAPVFSATVVSARIRIGVVVVLSLVLAPLAPAT---IDPLSGD 68

Query: 71  GFMITFEQIVIGVAMGMVTQFLVQIFVMLGQILGMQSSLGFASMVDPANGQNTPLLGQLF 130
           G      Q+++G A+G V + + +     G+++G   SLGFA +V+P  G +  +L + +
Sbjct: 69  GVATMAGQVLVGAAVGFVLKLVFEAVSFGGELVGQSMSLGFAEVVNPQAGGSANVLSEFY 128

Query: 131 MLLATLFFLVSDGHLKMIQLVVFSFKSLPIGSGSLTTVDFRELALWLGIMFKASLAVSLS 190
           +LL TL FL  DGHL++I L+  SF SLP G  ++       +A +   +F  ++ V+L 
Sbjct: 129 LLLVTLLFLAMDGHLRLIALLADSFHSLPPGMPAIDASGLHAVASFAAELFSGAVRVALP 188

Query: 191 GIIALLTVNLSFGVMTRAAPQLNIFSLGFSFALLVGLLLCWYIVHGL 237
            + +LL VN+ F  ++RAAP +N+F++GF   + +G +  W  +  L
Sbjct: 189 AMTSLLVVNVGFAAISRAAPSMNLFAVGFPITVSLGFIALWLALRSL 235