Pairwise Alignments

Query, 260 a.a., flagellar type III secretion system protein FliR from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., flagellar biosynthetic protein FliR from Enterobacter asburiae PDN3

 Score =  157 bits (396), Expect = 3e-43
 Identities = 81/221 (36%), Positives = 130/221 (58%), Gaps = 2/221 (0%)

Query: 9   LDFIANYFWPYTRIAAMLMVMTVTGARFVPARVRLYLGLALTFAVMPAIPAVPSDIALLS 68
           + ++  YFWP  RI A++    +   + +P RV++ LG+ ++  V P++P  P DI + S
Sbjct: 10  VQWLGVYFWPMLRIMALISTAPILSEKSIPKRVKVGLGIIISIIVAPSLP--PVDIPIFS 67

Query: 69  LQGFMITFEQIVIGVAMGMVTQFLVQIFVMLGQILGMQSSLGFASMVDPANGQNTPLLGQ 128
                +  +Q++IGVA+G   Q         G+++G+Q  L FA+ VDP +  N P+L +
Sbjct: 68  ANAVWVALQQVMIGVAVGFTMQLAFAAVRTAGELIGLQMGLSFATFVDPGSHLNMPVLAR 127

Query: 129 LFMLLATLFFLVSDGHLKMIQLVVFSFKSLPIGSGSLTTVDFRELALWLGIMFKASLAVS 188
           +  LLA L FL  +GHL +I ++V +F +LPIG   + +  F  L    G++F   L ++
Sbjct: 128 IIDLLAMLLFLSFNGHLWLISMLVDTFHTLPIGENPVNSNAFLALTRAAGLIFLNGLMLA 187

Query: 189 LSGIIALLTVNLSFGVMTRAAPQLNIFSLGFSFALLVGLLL 229
           L  I  LLTVNL+ G++ R APQL++F +GF   L VG+LL
Sbjct: 188 LPIITLLLTVNLALGLLNRMAPQLSVFVIGFPLTLTVGILL 228