Pairwise Alignments

Query, 260 a.a., flagellar type III secretion system protein FliR from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., flagellar type III secretion system protein FliR from Dickeya dianthicola ME23

 Score =  149 bits (377), Expect = 4e-41
 Identities = 82/249 (32%), Positives = 138/249 (55%), Gaps = 2/249 (0%)

Query: 8   VLDFIANYFWPYTRIAAMLMVMTVTGARFVPARVRLYLGLALTFAVMPAIPAVPSDIALL 67
           ++ +   +FWP  RI A++    +   R +  RV+L LG+ +   V P+IP   + I + 
Sbjct: 9   MISWFNQFFWPLVRILALISTAPIFNERAITRRVKLGLGVLIAIVVTPSIPH--TSIPVF 66

Query: 68  SLQGFMITFEQIVIGVAMGMVTQFLVQIFVMLGQILGMQSSLGFASMVDPANGQNTPLLG 127
           S  G  + F+Q++IGV +G   Q       + G+I+G+Q  L FA+  DP+ G N P++ 
Sbjct: 67  SATGVWMLFQQVLIGVMLGFAMQLAFVAIRLAGEIIGLQMGLSFATFFDPSGGPNMPVIA 126

Query: 128 QLFMLLATLFFLVSDGHLKMIQLVVFSFKSLPIGSGSLTTVDFRELALWLGIMFKASLAV 187
           +   LLA L FL  +GHL +I L+V SF ++PI +  ++   F  LA   G +F   L +
Sbjct: 127 RFMNLLALLLFLSMNGHLWLISLLVDSFHTIPISAEPISGNVFMTLAEAGGRIFSNGLML 186

Query: 188 SLSGIIALLTVNLSFGVMTRAAPQLNIFSLGFSFALLVGLLLCWYIVHGLYTHYDIYWQE 247
           +L  I  LLT+N++ G+++R APQL IF++GF   L  G+    ++V  L  + +  + E
Sbjct: 187 ALPLITLLLTINMALGLLSRLAPQLTIFAIGFPITLFAGITTVGFLVFLLSPYAEKLFGE 246

Query: 248 AEEQVCRLI 256
             + +  L+
Sbjct: 247 TYDLLADLL 255