Pairwise Alignments

Query, 376 a.a., flagellar biosynthesis protein FlhB from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., Flagellar biosynthesis protein FlhB from Variovorax sp. SCN45

 Score =  182 bits (462), Expect = 1e-50
 Identities = 114/363 (31%), Positives = 199/363 (54%), Gaps = 16/363 (4%)

Query: 1   MAESDGQERTEEATPRRLQQAKEKGQVARSKELASVSVLVVGAVSLMWFGEILAKGLMVA 60
           MAE D  +R E ATP +LQ+A+E+GQ A+S ++    V  V AV L W G         A
Sbjct: 1   MAEQD-LDRNEAATPYKLQRARERGQAAKSTDVVGAIVFTVAAVYLTWRG-------FGA 52

Query: 61  MQRLFELSREEIFDLGKLFDIIGG--SLVNLLLPLLMILSTLFIAALIGAAGVG-----G 113
           +   F   +  +   G++     G   L    L  + +LS  F A ++ AA VG     G
Sbjct: 53  VATQFRFDQAVLIQAGRMDPSGAGLWPLTERALRAVFVLSAPFFATVMLAAVVGNMMQTG 112

Query: 114 ISFSAEAAMPKLSKMNPLSGLKRMFGMQSWVELLKSILKVLLVSGVAFYLIEASQKDLFQ 173
              S +      +++NP++GLKR+F M+   +  ++++K+ L+  V+   ++A     + 
Sbjct: 113 PMLSFDPVKMDFNRINPVNGLKRLFSMRVLFDTARALIKLTLLGLVSVLALKALLGQFYG 172

Query: 174 LSLDVYPQNIFHALDILLNFVLLISCSLLVVVAIDIPFQIWQHAEQLKMTKQEVKDEYKD 233
           L+       +   LD L +  L ++  L ++  +D+ +   + A++++M+++++KDE K 
Sbjct: 173 LASLSPIGYLRTLLDDLSSVALKMALVLGLIALLDLMYTRREFAKKMRMSQRDIKDEAKH 232

Query: 234 TEGKPEVKGRIRMLQREAAQRRM-MAALPQADVIITNPEHFSVALRYKQNTDKAPVVIAK 292
            +G P ++ R+R L+RE  +R + +     ADV+ITNP HF+VAL+Y      +P ++AK
Sbjct: 233 RDGDPRIRARLRELRRETLKRSLALRETRNADVLITNPTHFAVALKYDHGRMVSPQLLAK 292

Query: 293 GVDHMALKIREIAREYDIAIVPAPPLARALYHTTELEQQIPDGLFVAVAQVLAFVFQLKQ 352
           G  HMA  +REIA  + I +V  PPLAR LY    ++Q +P  L+  VA+++ +VF +++
Sbjct: 293 GSGHMAAAMREIAARHGIPVVQNPPLARRLYRELPVDQAVPPELYAQVARIIVWVFAMRE 352

Query: 353 YRR 355
            R+
Sbjct: 353 QRQ 355