Pairwise Alignments

Query, 376 a.a., flagellar biosynthesis protein FlhB from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., flagellar biosynthesis protein B (NCBI) from Escherichia coli BW25113

 Score =  292 bits (748), Expect = 9e-84
 Identities = 158/368 (42%), Positives = 242/368 (65%), Gaps = 3/368 (0%)

Query: 5   DGQERTEEATPRRLQQAKEKGQVARSKELASVSVLVVGAVSLMWFGEI-LAKGLMVAMQR 63
           +  ++TE  TP RL++A+E+GQ+ RS+EL S+ +L+VG VS++WFG + LA+ L   +  
Sbjct: 4   ESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVG-VSVIWFGGVSLARRLSGMLSA 62

Query: 64  LFELSREEIFDLGKLFDIIGGSLVNLLLPLLMILSTLFIAALIGAAGVGGISFSAEAAMP 123
                   I D   +   I   +   +L LL ++S + + ALI    +GG+ FS ++  P
Sbjct: 63  GLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQP 122

Query: 124 KLSKMNPLSGLKRMFGMQSWVELLKSILKVLLVSGVAFYLIEASQKDLFQLSLDVYPQNI 183
           K SK+NPL G+KRMF  Q+  ELLK+ILK +LV  V  + +      + +L  +     +
Sbjct: 123 KFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAM 182

Query: 184 FHALDILLNFVLLISCSLLVVVAIDIPFQIWQHAEQLKMTKQEVKDEYKDTEGKPEVKGR 243
            +A+D++    LL+   ++ +V  D+ FQI+ H ++L+M++Q+++DE+K +EG P VKGR
Sbjct: 183 GNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGR 242

Query: 244 IRMLQREAAQRRMMAALPQADVIITNPEHFSVALRYKQNTDKAPVVIAKGVDHMALKIRE 303
           IR +QR AA+RRMMA +P+ADVI+ NP H+SVAL+Y +N   AP V+AKG   +AL+IRE
Sbjct: 243 IRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIRE 302

Query: 304 IAREYDIAIVPAPPLARALYHTTELEQQIPDGLFVAVAQVLAFVFQLKQYRRKGGQRPKL 363
           I  E ++  + APPLARALY   E+ QQIP  L+ AVA+VLA+V+QLK++R  GGQRP +
Sbjct: 303 IGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP-V 361

Query: 364 NEENMPIP 371
              ++P+P
Sbjct: 362 QPTHLPVP 369